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The edit distance between two graphs on the same vertex set is defined to be size of the symmetric difference of their edge sets. The edit distance function of a hereditary property, $\mathcal{H}$, is a function of $p$ and measures,…

Combinatorics · Mathematics 2011-02-22 Ryan Martin , Tracy McKay

Given two strings of length $n$ over alphabet $\Sigma$, and an upper bound $k$ on their edit distance, the algorithm of Myers (Algorithmica'86) and Landau and Vishkin (JCSS'88) computes the unweighted string edit distance in…

Data Structures and Algorithms · Computer Science 2023-02-09 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha

Finding the point in an algebraic variety that is closest to a given point is an optimization problem with many applications. We study the case when the variety is a Fermat hypersurface. Our formula for its Euclidean distance degree is a…

Algebraic Geometry · Mathematics 2015-10-22 Hwangrae Lee

We introduce new distance measures for comparing straight-line embedded graphs based on the Fr\'echet distance and the weak Fr\'echet distance. These graph distances are defined using continuous mappings and thus take the combinatorial…

Computational Geometry · Computer Science 2019-09-12 Hugo A. Akitaya , Maike Buchin , Bernhard Kilgus , Stef Sijben , Carola Wenk

We revisit the classical polygonal line simplification problem and study it using the Hausdorff distance and Fr\'echet distance. Interestingly, no previous authors studied line simplification under these measures in its pure form, namely:…

Computational Geometry · Computer Science 2018-03-28 Marc van Kreveld , Maarten Löffler , Lionov Wiratma

We present simple and practical $(1+\eps)$-approximation algorithm for the Frechet distance between curves. To analyze this algorithm we introduce a new realistic family of curves, $c$-packed curves, that is closed under simplification. We…

Computational Geometry · Computer Science 2012-01-31 Anne Driemel , Sariel Har-Peled , Carola Wenk

In 2012 Driemel et al. \cite{DBLP:journals/dcg/DriemelHW12} introduced the concept of $c$-packed curves as a realistic input model. In the case when $c$ is a constant they gave a near linear time $(1+\varepsilon)$-approximation algorithm…

Computational Geometry · Computer Science 2020-09-18 Joachim Gudmundsson , Yuan Sha , Sampson Wong

The (unweighted) tree edit distance problem for $n$ node trees asks to compute a measure of dissimilarity between two rooted trees with node labels. The current best algorithm from more than a decade ago runs in $O(n ^ 3)$ time [Demaine,…

Data Structures and Algorithms · Computer Science 2021-11-12 Xiao Mao

In the usual trace reconstruction problem, the goal is to exactly reconstruct an unknown string of length $n$ after it passes through a deletion channel many times independently, producing a set of traces (i.e., random subsequences of the…

Data Structures and Algorithms · Computer Science 2020-12-17 Sami Davies , Miklos Z. Racz , Cyrus Rashtchian , Benjamin G. Schiffer

In the presented paper we study the Length-Bounded Cut problem for special graph classes as well as from a parameterized-complexity viewpoint. Here, we are given a graph $G$, two vertices $s$ and $t$, and positive integers $\beta$ and…

Data Structures and Algorithms · Computer Science 2019-10-09 Matthias Bentert , Klaus Heeger , Dušan Knop

In this paper, we propose new techniques for solving geometric optimization problems involving interpoint distances of a point set in the plane. Given a set $P$ of $n$ points in the plane and an integer $1 \leq k \leq \binom{n}{2}$, the…

Computational Geometry · Computer Science 2024-03-08 Haitao Wang , Yiming Zhao

The goal in the min-\# curve simplification problem is to reduce the number of the vertices of a polygonal curve without changing its shape significantly. We study curve-restricted min-\# simplification of polygonal curves, in which the…

Computational Geometry · Computer Science 2019-03-05 Ali Gholami Rudi

$\newcommand{\eps}{\varepsilon}$ In this paper, we consider two important problems defined on finite metric spaces, and provide efficient new algorithms and approximation schemes for these problems on inputs given as graph shortest path…

Computational Geometry · Computer Science 2021-02-23 David Eppstein , Sariel Har-Peled , Anastasios Sidiropoulos

The $H$-Free Edge Deletion problem asks, for a given graph $G$ and an integer $k$, whether it is possible to delete at most $k$ edges from $G$ to make it $H$-free, that is, not containing $H$ as an induced subgraph. The $H$-Free Edge…

Data Structures and Algorithms · Computer Science 2018-05-15 Ivan Bliznets , Marek Cygan , Pawel Komosa , Michal Pilipczuk

The {\em edit distance} between two ordered trees with vertex labels is the minimum cost of transforming one tree into the other by a sequence of elementary operations consisting of deleting and relabeling existing nodes, as well as…

Data Structures and Algorithms · Computer Science 2010-12-01 Erik D. Demaine , Shay Mozes , Benjamin Rossman , Oren Weimann

In this paper we define a novel edit distance for merge trees, which we argue to be suitable for a good range of applications. Relying also on some technical results contained in other works, we investigate its stability properties, which…

Metric Geometry · Mathematics 2024-11-22 Matteo Pegoraro

Computing the edit distance of two strings is one of the most basic problems in computer science and combinatorial optimization. Tree edit distance is a natural generalization of edit distance in which the task is to compute a measure of…

Data Structures and Algorithms · Computer Science 2022-09-16 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha , Hamed Saleh

Graph edit distance (GED) is a powerful and flexible graph matching paradigm that can be used to address different tasks in structural pattern recognition, machine learning, and data mining. In this paper, some new binary linear programming…

Data Structures and Algorithms · Computer Science 2015-05-22 Julien Lerouge , Zeina Abu-Aisheh , Romain Raveaux , Pierre Héroux , Sébastien Adam

In this paper we consider the problem of approximating Euclidean distances by the infinite integer grid graph. Although the topology of the graph is fixed, we have control over the edge-weight assignment $w:E\to \mathbb{R}_{\ge 0}$, and…

Computational Geometry · Computer Science 2025-11-25 Zixi Cai , Kuowen Chen , Shengquan Du , Arnold Filtser , Seth Pettie , Daniel Skora

Almost 30 years ago, Zhang and Shasha (1989) published a seminal paper describing an efficient dynamic programming algorithm computing the tree edit distance, that is, the minimum number of node deletions, insertions, and replacements that…

Data Structures and Algorithms · Computer Science 2022-09-15 Benjamin Paaßen