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By stacking PbTe layers there is a non-monotonic topological phase transition as a function of the number of monolayers. Based on first principles calculations we find that the proper stacked crystal symmetry determines the topological…

Mesoscale and Nanoscale Physics · Physics 2017-11-07 Daniely Bassanezi , Ernesto O. Wrasse , Tome M. Schmidt

We introduce a novel model, comprising self-avoiding surfaces and incorporating edges and tubules, that is designed to characterize the structural morphologies and transitions observed within the endoplasmic reticulum (ER). By employing…

Soft Condensed Matter · Physics 2024-04-09 Jaya Kumar Alageshan , Yashodhan Hatwalne , Rahul Pandit

A simple one-dimensional mechanical model is proposed for splitting instability in swollen membranes. The splitting instability occurs by ring constriction. The bifurcation can be both subcritical and supercritical, depending on the…

Soft Condensed Matter · Physics 2015-06-18 Hidetsugu Sakaguchi , Satomi Maeyama

Tissue growth kinetics and interface dynamics depend on the properties of the tissue environment and cell-cell interactions. In cellular environments, substrate heterogeneity and geometry arise from a variety factors, such as the structure…

Soft Condensed Matter · Physics 2023-03-21 Mahmood Mazarei , Jan Astrom , Jan Westerlund , Mikko Karttunen

The shape deformation of a three-dimensional axisymmetric vesicle with encapsulated filaments or impurities is analyzed by integrating a dissipation dynamics. This method can incorporate systematically the constraint of a fixed surface area…

Soft Condensed Matter · Physics 2009-11-07 Akiyoshi shibuya , Yukio Saito , Hiroyuki Hyuga

Growth and folding in one-layered model tissue sheets are studied in a stochastic, lattice-free single cell model which considers the discrete cellular structure of the tissue, and a coarse grained analytical approach. The polarity of the…

Statistical Mechanics · Physics 2007-05-23 Dirk Drasdo

Our previous molecular dynamic simulation studies of simple two-dimensional (2D) systems \cite{matt_big} suggested that both geometrical defects (localized, large-amplitude deviations from hexagonal ordering) and topological defects…

Statistical Mechanics · Physics 2007-05-23 Yves Lansac , Matthew A. Glaser , Noel A. Clark

The known ground state of ultrathin smectic films confined to the surface of a sphere is described by four +1/2 defects assembled on a great circle and a director which follows geodesic lines. Using a simple perturbative approach we show…

Soft Condensed Matter · Physics 2016-01-12 O. V. Manyuhina , M. J. Bowick

In layered materials, a common mode of deformation involves buckling of the layers under tensile deformation in the direction perpendicular to the layers. The instability mechanism, which operates in elastic materials from geological to…

Materials Science · Physics 2012-01-13 Ali Makke , Michel Perez , Olivier Lame , Jean-Louis Barrat

We demonstrate that field theories involving explicit breaking of continous symmetries, incorporate two generic classes of topological defects each of which is stable for a particular range of parameters. The first class includes defects of…

High Energy Physics - Phenomenology · Physics 2016-09-06 Minos Axenides , Leandros Perivolaropoulos

Complex fluids such as emulsions, colloidal gels, polymer or surfactant solutions are all characterized by the existence of a "microstructure" which may couple to an external flow on timescales that are easily probed in experiments. Such a…

Soft Condensed Matter · Physics 2015-02-11 Christophe Perge , Marc-Antoine Fardin , Sebastien Manneville

Topological defects are at the root of the large-scale organization of liquid crystals. In two-dimensional active nematics, two classes of topological defects of charges $\pm 1/2$ are known to play a major role due to active stresses.…

Soft Condensed Matter · Physics 2022-04-08 Louis Brézin , Thomas Risler , Jean-François Joanny

A ubiquitous motif in nature is the self-similar hierarchical buckling of a thin lamina near its margins. This is seen in leaves, flowers, fungi, corals, and marine invertebrates. We investigate this morphology from the perspective of…

In this paper we present a three-dimensional discrete model governing the deformation of a viral capsid, modelled as a regular icosahedron and subjected not to cross a given flat rigid surface on which it initially lies in correspondence of…

Analysis of PDEs · Mathematics 2022-04-15 Paolo Piersanti , Kristen White , Bogdan Dragnea , Roger Temam

Topological point defects on orientationally ordered spheres, and on deformable fluid vesicles have been partly motivated by their potential applications in creating super-atoms with directional bonds through functionalization of the…

Soft Condensed Matter · Physics 2020-05-27 C. Saichand , Jaya Kumar Alageshan , Arun Roy , Yashodhan Hatwalne

The mechanical properties of tissues play an essential role for all tissue properties such as cell division, and differentiation or morphogenesis. Here, we study theoretically the rheology of 2-dimensional epithelial tissues described by a…

Soft Condensed Matter · Physics 2023-12-18 Doron Grossman , Jean-Francois Joanny

Here we show that coupling to curvature has profound effects on collective motion in active systems, leading to patterns not observed in flat space. Biological examples of such active motion in curved environments are numerous: curvature…

Soft Condensed Matter · Physics 2015-03-05 Rastko Sknepnek , Silke Henkes

Experiments and theory have shown that cell monolayers and epithelial tissues exhibit solid-liquid and glass-liquid transitions. These transitions are biologically relevant to our understanding of embryonic development, wound healing, and…

Soft Condensed Matter · Physics 2020-07-22 Benjamin Loewe , Michael Chiang , Davide Marenduzzo , M. Cristina Marchetti

The dynamics of active smectic liquid crystals confined on a spherical surface is explored through an active phase field crystal model. Starting from an initially randomly perturbed isotropic phase, several types of topological defects are…

Soft Condensed Matter · Physics 2025-03-11 Michael Nestler , Simon Praetorius , Zhi-Feng Huang , Hartmut Löwen , Axel Voigt

We analyse liquid-crystalline ordering in vertically vibrated monolayers of cylinders confined in a circular cavity. Short cylinders form tetratic arrangements with C$_4$ symmetry. This symmetry, which is incompatible with the geometry of…