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The enhancement of surface diffusion (DS) over the bulk (DV) in metallic glasses (MGs) is well documented and likely to strongly influence the properties of glasses grown by vapor deposition. Here, we use classical molecular dynamics…

Materials Science · Physics 2021-08-20 Ajay Annamareddy , Yuhui Li , Lian Yu , Paul M. Voyles , Dane Morgan

Cell neighbor exchanges are integral to tissue rearrangements in biology, including development and repair. Often these processes occur via topological T1 transitions analogous to those observed in foams, grains and colloids. However, in…

Soft Condensed Matter · Physics 2023-05-16 Amit Das , Srikanth Sastry , Dapeng Bi

We introduce a novel algorithm to perform event-driven simulations of hard rigid bodies of arbitrary shape, that relies on the evaluation of the geometric distance. In the case of a monodisperse system of uniaxial hard ellipsoids,we perform…

Soft Condensed Matter · Physics 2009-11-13 Cristiano De Michele , Rolf Schilling , Francesco Sciortino

Among amorphous states, glass is defined by relaxation times longer than the observation time. This nonergodic nature makes the understanding of glassy systems an involved topic, with complex aging effects or responses to further…

Recent experiments have revealed that cytoplasms become glassy when their metabolism is suppressed, while they maintain fluidity in a living state. The mechanism of this active fluidization is not clear, especially for bacterial cytoplasms,…

Soft Condensed Matter · Physics 2019-12-18 Norihiro Oyama , Takeshi Kawasaki , Hideyuki Mizuno , Atsushi Ikeda

We explore several potential issues that have been raised over the years regarding the "entropic droplet" scenario of activated transport in liquids, due to Wolynes and coworkers, with the aim of clarifying the status of various…

Disordered Systems and Neural Networks · Physics 2014-12-05 Vassiliy Lubchenko , Pyotr Rabochiy

Coherent angular rotation of epithelial cells is thought to contribute to many vital physiological processes including tissue morphogenesis and glandular formation. However, factors regulating this motion, and the implications of this…

Cell Behavior · Quantitative Biology 2016-05-10 S. S. Soumya , Animesh Gupta , Andrea Cugno , Luca Deseri , Kaushik Dayal , Dibyendu Das , Shamik Sen , Mandar M. Inamdar

Epithelial tissues play a fundamental role in various morphogenetic events during development and early embryogenesis. Although epithelial monolayers are often modeled as two-dimensional (2D) elastic surfaces, they distinguish themselves…

Soft Condensed Matter · Physics 2020-06-15 Benjamin Loewe , Francesco Serafin , Suraj Shankar , Mark J. Bowick , M. Cristina Marchetti

Generalizing the mode-coupling theory for ideal liquid-glass transitions, equations of motion are derived for the correlation functions describing the glassy dynamics of a diatomic probe molecule immersed in a simple glass-forming system.…

Soft Condensed Matter · Physics 2009-10-31 S. -H. Chong , W. Gotze , A. P. Singh

We study colloidal particle dynamics of a model glass system using confocal and fluorescence microscopy as the sample evolves from a hard-sphere glass to a liquid with attractive interparticle interactions. The transition from hard-sphere…

Soft Condensed Matter · Physics 2015-05-13 Andrzej Latka , Yilong Han , Ahmed M. Alsayed , Andrew B. Schofield , A. G. Yodh , Piotr Habdas

We propose a simple microscopic model of molecular dynamics simulation to study orientational glass in three dimensions. We present simulation results for mixtures of mildly anisotropic particles and spherical impurities. We realize fcc…

Soft Condensed Matter · Physics 2012-10-29 Kyohei Takae , Akira Onuki

Elucidating the nature of the glass transition has been the holy grail of condensed matter physics and statistical mechanics for several decades. A phenomenological aspect that makes glass formation a conceptually formidable problem is that…

Soft Condensed Matter · Physics 2016-08-11 Shreyas Gokhale , K. Hima Nagamanasa , A. K. Sood , Rajesh Ganapathy

The reformulation of the mode-coupling theory (MCT) of the liquid-glass transition which incorporates the element of metastability is applied to the hard-sphere system. It is shown that the glass transition in this system is not a sharp one…

Condensed Matter · Physics 2016-08-31 Joonhyun Yeo

The transition of an epithelial layer from a stationary, quiescent state to a highly migratory, dynamic state is required for wound healing, development, and regeneration. This transition, known as the unjamming transition (UJT), is…

Biological Physics · Physics 2025-03-13 Margherita De Marzio , Amit Das , Jeffrey J. Fredberg , Dapeng Bi

We study theoretically and numerically the elastic properties of hard sphere glasses, and provide a real-space description of their mechanical stability. In contrast to repulsive particles at zero-temperature, we argue that the presence of…

Soft Condensed Matter · Physics 2015-06-18 E. DeGiuli , E. Lerner , C. Brito , M. Wyart

Structural relaxation in binary hard spherical particles has been shown recently to exhibit a wealth of remarkable features when size disparity or mixture's composition is varied. In this paper, we test whether or not similar dynamical…

Soft Condensed Matter · Physics 2014-12-03 Wen-Sheng Xu , Zhao-Yan Sun , Li-Jia An

A number of factors, such as, cell-cell interactions and self-propulsion of cells driven by cytoskeletal forces determine tissue morphologies and dynamics. To explore the interplay between these factors in controlling the dynamics at the…

Soft Condensed Matter · Physics 2025-05-12 Rajsekhar Das , Xin Li , Sumit Sinha , D. Thirumalai

The autocorrelation function of pattern fluctuation is used to study soft-mode turbulence (SMT), a spatiotemporal chaos observed in homeotropic nematics. We show that relaxation near the electroconvection threshold deviates from the…

Soft Condensed Matter · Physics 2012-03-27 Fahrudin Nugroho , Takayuki Narumi , Yoshiki Hidaka , Junichi Yoshitani , Masaru Suzuki , Shoichi Kai

External stress can accelerate molecular mobility of amorphous solids by several orders of magnitude. The changes in mobility are commonly interpreted through the Eyring model, which invokes an empirical activation volume whose origin…

Soft Condensed Matter · Physics 2022-03-14 Entao Yang , Robert A. Riggleman

Driven surface diffusion occurs, for example, in molecular beam epitaxy when particles are deposited under an oblique angle. Elastic phase transitions happen when normal modes in crystals become soft due to the vanishing of certain elastic…

Statistical Mechanics · Physics 2015-06-19 Hans-Karl Janssen , Olaf Stenull
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