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A main task in cryo-electron microscopy single particle reconstruction is to find a three-dimensional model of a molecule given a set of its randomly oriented and positioned noisy projection-images. In this work, we propose an algorithm for…

Computational Physics · Physics 2022-11-11 Adi Shasha Geva , Yoel Shkolnisky

Cyclopropenone was first detected in the cold and less dense envelope of Sagittarius B2(N). It was found later in several cold dark clouds and it may be possible to detect its minor isotopic species in these environments. In addition, the…

Instrumentation and Methods for Astrophysics · Physics 2021-03-31 Holger S. P. Müller , Ananya Brahmi M. , Jean-Claude Guillemin , Frank Lewen , Stephan Schlemmer

Ro-vibrational spectra of the $\nu_3$ and $\nu_6$ bands of chloromethane ($\mathrm{CH_3Cl}$) were recorded in the 650--1130 $\mathrm{cm}^{-1}$ range using a Fourier transform spectrometer at the AILES beamline of the SOLEIL synchrotron…

Instrumentation and Methods for Astrophysics · Physics 2023-09-22 Pierre Hardy , C. Richard , Vincent Boudon , Mohammad Vaseem , Laurent Manceron , Nawel Dridi

Developing machine learning protocols for molecular simulations requires comprehensive and efficient datasets. Here we introduce the QMe14S dataset, comprising 186,102 small organic molecules featuring 14 elements (H, B, C, N, O, F, Al, Si,…

Chemical Physics · Physics 2025-02-03 Mingzhi Yuan , Zihan Zou , Wei Hu

We report an ab initio study on the spectroscopy of the open-shell diatomic molecule yttrium oxide, YO. The study considers the six lowest doublet states, $X\,{}^{2}\Sigma^{+}$, $A\,{}^{2}\Pi$, $C\,{}^{2}\Pi$, $A'\,{}^{2}\Delta$,…

Chemical Physics · Physics 2020-03-04 Alexander N. Smirnov , Victor G. Solomonik , Sergei N. Yurchenko , Jonathan Tennyson

The rotational spectrum of the formaldehyde isotopologue H$_2$C$^{17}$O was investigated between 0.56 and 1.50 THz using a sample of natural isotopic composition. In addition, transition frequencies were determined for H$_2$C$^{18}$O and…

Astrophysics of Galaxies · Physics 2019-03-13 Holger S. P. Müller , Frank Lewen

Our recent re-analysis of the solar photospheric spectra with non-local thermodynamic equilibrium (non-LTE) models resulted in higher metal abundances compared to previous works. When applying the new chemical abundances to Standard Solar…

Solar and Stellar Astrophysics · Physics 2022-09-07 Manuel A. Bautista , Maria Bergemann , Helena Carvajal Gallego , Sébastien Gamrath , Patrick Palmeri , Pascal Quinet

A parameterization strategy for molecular models on the basis of force fields is proposed, which allows a rapid development of models for small molecules by using results from quantum mechanical (QM) ab initio calculations and thermodynamic…

Chemical Physics · Physics 2009-04-22 Bernhard Eckl , Jadran Vrabec , Hans Hasse

We present Phantom, a fast, parallel, modular and low-memory smoothed particle hydrodynamics and magnetohydrodynamics code developed over the last decade for astrophysical applications in three dimensions. The code has been developed with a…

We present a spectroscopic investigation of $^{169}\mathrm{Tm}^+$ that provides two key foundations for its use as a platform for advanced quantum applications. First, we establish the complete spectroscopic road map for optical cycling…

The hydroxyl radical, hereafter referred to as the OH molecule (OHM), carries both electric and magnetic dipole moments and, as a diatomic molecule, admits a comparatively simple and accurate model. This makes it a natural quantum probe for…

Quantum Physics · Physics 2026-05-01 Luca Previdi , Francesco Albarelli , Matteo G. A. Paris

We computationally demonstrate a new method for coherently controlling the rotation-axis direction in asymmetric top molecules with an optical centrifuge. Appropriately chosen electric-field strengths and the centrifuge's acceleration rate…

Chemical Physics · Physics 2021-06-16 Emil J. Zak , Andrey Yachmenev , Jochen Küpper

Is it possible to infer the time evolving quantum state of a multichromophoric system from a sequence of two-dimensional electronic spectra (2D-ES) as a function of waiting time? Here we provide a positive answer for a tractable model…

Quantum Physics · Physics 2015-05-27 Joel Yuen-Zhou , Alán Aspuru-Guzik

We consider the presence of oscillations in the primordial bispectrum, inspired by three different cosmological models; features in the primordial potential, resonant type non-Gaussianities and deviation from the standard Bunch Davies…

Cosmology and Nongalactic Astrophysics · Physics 2016-06-03 P. Daniel Meerburg

The OI 777 nm triplet is a key diagnostic of oxygen abundances in the atmospheres of FGK-type stars; however it is sensitive to departures from local thermodynamic equilibrium (LTE). The accuracy of non-LTE line formation calculations has…

Solar and Stellar Astrophysics · Physics 2018-10-30 A. M. Amarsi , P. S. Barklem , M. Asplund , R. Collet , O. Zatsarinny

In the present work, we investigate the ionization of molecules of biological interest by the impact of multicharged ions in the intermediate to high energy range. We performed full non-perturbative distorted-wave calculations (CDW) for…

Atomic and Molecular Clusters · Physics 2020-09-18 A. M. P. Mendez , C. C. Montanari , J. E. Miraglia

This study presents a novel optimisation technique for atomic structure calculations using the Flexible Atomic Code, focussing on complex multielectron systems relevant to $r$-process nucleosynthesis and kilonova modelling. We introduce a…

High-entropy oxide (HEO) thermodynamics transcend temperature-centric approaches, spanning a multidimensional landscape where oxygen chemical potential plays a decisive role. Here, we experimentally demonstrate how controlling the oxygen…

The orientational correlation scheme introduced earlier for tetrahedral molecules is extended for being able to classify orientational correlations between pairs of high symmetry molecules. While in the original algorithm a given…

Chemical Physics · Physics 2021-08-13 László Temleitner

Astrophysical molecular spectroscopy is an important means of searching for new physics through probing the variation of the proton-to-electron mass ratio, $\mu$. New molecular probes could provide tighter constraints on the variation of…

Atomic Physics · Physics 2020-08-26 Anna-Maree Syme , Laura K. McKemmish