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Nonlinear dimensionality reduction methods have demonstrated top-notch performance in many pattern recognition and image classification tasks. Despite their popularity, they suffer from highly expensive time and memory requirements, which…

Computational Geometry · Computer Science 2014-04-08 Amir Najafi , Amir Joudaki , Emad Fatemizadeh

Manifold learning techniques for nonlinear dimension reduction assume that high-dimensional feature vectors lie on a low-dimensional manifold, then attempt to exploit manifold structure to obtain useful low-dimensional Euclidean…

Machine Learning · Statistics 2021-10-25 Michael W. Trosset , Gokcen Buyukbas

Manifold learning offers nonlinear dimensionality reduction of high-dimensional datasets. In this paper, we bring geometry processing to bear on manifold learning by introducing a new approach based on metric connection for generating a…

Machine Learning · Computer Science 2018-11-05 Max Budninskiy , Glorian Yin , Leman Feng , Yiying Tong , Mathieu Desbrun

New geometric and computational analyses of power-weighted shortest-path distances (PWSPDs) are presented. By illuminating the way these metrics balance density and geometry in the underlying data, we clarify their key parameters and…

Machine Learning · Statistics 2021-06-09 Anna Little , Daniel McKenzie , James Murphy

In the machine learning field, dimensionality reduction is an important task. It mitigates the undesired properties of high-dimensional spaces to facilitate classification, compression, and visualization of high-dimensional data. During the…

Machine Learning · Computer Science 2019-11-19 Mohammed Elhenawy , Mahmoud Masoud , Sebastian Glaser , Andry Rakotonirainy

In this paper, we propose Wasserstein Isometric Mapping (Wassmap), a nonlinear dimensionality reduction technique that provides solutions to some drawbacks in existing global nonlinear dimensionality reduction algorithms in imaging…

Machine Learning · Computer Science 2023-02-22 Keaton Hamm , Nick Henscheid , Shujie Kang

Dense Passage Retrieval (DPR) typically relies on Euclidean or cosine distance to measure query-passage relevance in embedding space, which is effective when embeddings lie on a linear manifold. However, our experiments across DPR…

Information Retrieval · Computer Science 2025-09-18 Yifan Liu , Qianfeng Wen , Mark Zhao , Jiazhou Liang , Scott Sanner

Analyzing relationships between objects is a pivotal problem within data science. In this context, Dimensionality reduction (DR) techniques are employed to generate smaller and more manageable data representations. This paper proposes a new…

Machine Learning · Statistics 2025-07-08 Rafael P. Eufrazio , Eduardo Fernandes Montesuma , Charles C. Cavalcante

Acquiring plausible pathways on high-dimensional structural distributions is beneficial in several domains. For example, in the drug discovery field, a protein conformational pathway, i.e. a highly probable sequence of protein structural…

Quantitative Methods · Quantitative Biology 2025-06-04 Ziyad Oulhaj , Yoshiyuki Ishii , Kento Ohga , Kimihiro Yamazaki , Mutsuyo Wada , Yuhei Umeda , Takashi Kato , Yuichiro Wada , Hiroaki Kurihara

The problem of finding suitable point embedding or geometric configurations given only Euclidean distance information of point pairs arises both as a core task and as a sub-problem in a variety of machine learning applications. In this…

Machine Learning · Computer Science 2024-10-23 Ipsita Ghosh , Abiy Tasissa , Christian Kümmerle

The Densest Subgraph Problem (DSP) is widely used to identify community structures and patterns in networks such as bioinformatics and social networks. While solvable in polynomial time, traditional exact algorithms face computational and…

Data Structures and Algorithms · Computer Science 2025-09-19 Dorit S. Hochbaum , Ayleen Irribarra-Cortés , Olivier Goldschmidt , Roberto Asín-Achá

Intrinsic isometric shape matching has become the standard approach for pose invariant correspondence estimation among deformable shapes. Most existing approaches assume global consistency, i.e., the metric structure of the whole manifold…

Computer Vision and Pattern Recognition · Computer Science 2014-01-14 Alan Brunton , Michael Wand , Stefanie Wuhrer , Hans-Peter Seidel , Tino Weinkauf

Predicting human scanpaths when exploring panoramic videos is a challenging task due to the spherical geometry and the multimodality of the input, and the inherent uncertainty and diversity of the output. Most previous methods fail to give…

Computer Vision and Pattern Recognition · Computer Science 2025-08-18 Mu Li , Kanglong Fan , Kede Ma

Cardiac parametric mapping is useful for evaluating cardiac fibrosis and edema. Parametric mapping relies on single-shot heartbeat-by-heartbeat imaging, which is susceptible to intra-shot motion during the imaging window. However, reducing…

Image and Video Processing · Electrical Eng. & Systems 2025-03-25 Calder D. Sheagren , Brenden T. Kadota , Jaykumar H. Patel , Mark Chiew , Graham A. Wright

In this paper we propose an algorithm for aligning three-dimensional objects when represented as density maps, motivated by applications in cryogenic electron microscopy. The algorithm is based on minimizing the 1-Wasserstein distance…

Image and Video Processing · Electrical Eng. & Systems 2024-03-13 Amit Singer , Ruiyi Yang

In order to process efficiently ever-higher dimensional data such as images, sentences, or audio recordings, one needs to find a proper way to reduce the dimensionality of such data. In this regard, SVD-based methods including PCA and…

Machine Learning · Computer Science 2021-03-09 Quentin Fournier , Daniel Aloise

When deciding where to place access points in a wireless network, it is useful to model the signal propagation loss between a proposed antenna location and the areas it may cover. The indoor dominant path (IDP) model, introduced by…

Data Structures and Algorithms · Computer Science 2018-05-17 David Applegate , Aaron Archer , David S. Johnson , Evdokia Nikolova , Mikkel Thorup , Ger Yang

Sampling-based motion planners rely on incremental densification to discover progressively shorter paths. After computing feasible path $\xi$ between start $x_s$ and goal $x_t$, the Informed Set (IS) prunes the configuration space…

Robotics · Computer Science 2021-04-13 Aditya Mandalika , Rosario Scalise , Brian Hou , Sanjiban Choudhury , Siddhartha S. Srinivasa

The problem of recovering the configuration of points from their partial pairwise distances, referred to as the Euclidean Distance Matrix Completion (EDMC) problem, arises in a broad range of applications, including sensor network…

Optimization and Control · Mathematics 2026-05-07 Chandler Smith , HanQin Cai , Abiy Tasissa

Data-sensitive metrics adapt distances locally based the density of data points with the goal of aligning distances and some notion of similarity. In this paper, we give the first exact algorithm for computing a data-sensitive metric called…

Computational Geometry · Computer Science 2020-04-22 Timothy Chu , Gary Miller , Donald Sheehy
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