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Convolutional Neural Networks (CNNs) have been recently employed to solve problems from both the computer vision and medical image analysis fields. Despite their popularity, most approaches are only able to process 2D images while most…

Computer Vision and Pattern Recognition · Computer Science 2016-06-16 Fausto Milletari , Nassir Navab , Seyed-Ahmad Ahmadi

The success of Convolutional Neural Networks (CNNs) in 3D medical image segmentation relies on massive fully annotated 3D volumes for training that are time-consuming and labor-intensive to acquire. In this paper, we propose to annotate a…

Computer Vision and Pattern Recognition · Computer Science 2023-02-14 Shuwei Zhai , Guotai Wang , Xiangde Luo , Qiang Yue , Kang Li , Shaoting Zhang

Medical image segmentation is an important step in medical image analysis. With the rapid development of convolutional neural network in image processing, deep learning has been used for medical image segmentation, such as optic disc…

Computer Vision and Pattern Recognition · Computer Science 2019-03-08 Zaiwang Gu , Jun Cheng , Huazhu Fu , Kang Zhou , Huaying Hao , Yitian Zhao , Tianyang Zhang , Shenghua Gao , Jiang Liu

There has been a debate in 3D medical image segmentation on whether to use 2D or 3D networks, where both pipelines have advantages and disadvantages. 2D methods enjoy a low inference time and greater transfer-ability while 3D methods are…

Computer Vision and Pattern Recognition · Computer Science 2019-11-26 Qihang Yu , Yingda Xia , Lingxi Xie , Elliot K. Fishman , Alan L. Yuille

In-context learning (ICL) with Large Vision Models (LVMs) presents a promising avenue in medical image segmentation by reducing the reliance on extensive labeling. However, the ICL performance of LVMs highly depends on the choices of visual…

Computer Vision and Pattern Recognition · Computer Science 2024-07-17 Chenwei Wu , David Restrepo , Zitao Shuai , Zhongming Liu , Liyue Shen

Deep learning highly relies on the quantity of annotated data. However, the annotations for 3D volumetric medical data require experienced physicians to spend hours or even days for investigation. Self-supervised learning is a potential…

Image and Video Processing · Electrical Eng. & Systems 2020-07-20 Xing Tao , Yuexiang Li , Wenhui Zhou , Kai Ma , Yefeng Zheng

Medical image segmentation is fundamental for biomedical discovery. Existing methods lack generalizability and demand extensive, time-consuming manual annotation for new clinical application. Here, we propose MedSAM-3, a text promptable…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Anglin Liu , Rundong Xue , Xu R. Cao , Yifan Shen , Yi Lu , Xiang Li , Qianqian Chen , Jintai Chen

Recent advances in deep learning, like 3D fully convolutional networks (FCNs), have improved the state-of-the-art in dense semantic segmentation of medical images. However, most network architectures require severely downsampling or…

Computer Vision and Pattern Recognition · Computer Science 2018-06-07 Holger R. Roth , Chen Shen , Hirohisa Oda , Takaaki Sugino , Masahiro Oda , Yuichiro Hayashi , Kazunari Misawa , Kensaku Mori

Self-Supervised Learning (SSL) has demonstrated promising results in 3D medical image analysis. However, the lack of high-level semantics in pre-training still heavily hinders the performance of downstream tasks. We observe that 3D medical…

Image and Video Processing · Electrical Eng. & Systems 2024-04-19 Linshan Wu , Jiaxin Zhuang , Hao Chen

Large-scale supervised pretraining is rapidly reshaping 3D medical image segmentation. However, existing efforts focus primarily on increasing dataset size and overlook the question of whether the backbone network is an effective…

Image and Video Processing · Electrical Eng. & Systems 2025-12-22 Saikat Roy , Yannick Kirchhoff , Constantin Ulrich , Maximillian Rokuss , Tassilo Wald , Fabian Isensee , Klaus Maier-Hein

Sketch semantic segmentation is a well-explored and pivotal problem in computer vision involving the assignment of pre-defined part labels to individual strokes. This paper presents ContextSeg - a simple yet highly effective approach to…

Computer Vision and Pattern Recognition · Computer Science 2024-03-27 Jiawei Wang , Changjian Li

Direct automatic segmentation of objects from 3D medical imaging, such as magnetic resonance (MR) imaging, is challenging as it often involves accurately identifying a number of individual objects with complex geometries within a large…

Image and Video Processing · Electrical Eng. & Systems 2021-09-23 Wei Dai , Boyeong Woo , Siyu Liu , Matthew Marques , Craig B. Engstrom , Peter B. Greer , Stuart Crozier , Jason A. Dowling , Shekhar S. Chandra

Recently, deep learning enabled the accurate segmentation of various diseases in medical imaging. These performances, however, typically demand large amounts of manual voxel annotations. This tedious process for volumetric data becomes more…

In this paper, we explore the potential of visual in-context learning to enable a single model to handle multiple tasks and adapt to new tasks during test time without re-training. Unlike previous approaches, our focus is on training…

Computer Vision and Pattern Recognition · Computer Science 2025-07-03 Simon Reiß , Zdravko Marinov , Alexander Jaus , Constantin Seibold , M. Saquib Sarfraz , Erik Rodner , Rainer Stiefelhagen

Deep learning approaches have made tremendous progress in the field of semantic segmentation over the past few years. However, most current approaches operate in the 2D image space. Direct semantic segmentation of unstructured 3D point…

Computer Vision and Pattern Recognition · Computer Science 2019-12-20 Francis Engelmann , Theodora Kontogianni , Alexander Hermans , Bastian Leibe

The scarcity of annotations poses a significant challenge in medical image analysis. Large-scale pre-training has emerged as a promising label-efficient solution, owing to the utilization of large-scale data, large models, and advanced…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Linshan Wu , Jiaxin Zhuang , Hao Chen

Timely and affordable computer-aided diagnosis of retinal diseases is pivotal in precluding blindness. Accurate retinal vessel segmentation plays an important role in disease progression and diagnosis of such vision-threatening diseases. To…

Image and Video Processing · Electrical Eng. & Systems 2023-04-26 Tariq M. Khan , Syed S. Naqvi , Antonio Robles-Kelly , Imran Razzak

Recently deep residual learning with residual units for training very deep neural networks advanced the state-of-the-art performance on 2D image recognition tasks, e.g., object detection and segmentation. However, how to fully leverage…

Computer Vision and Pattern Recognition · Computer Science 2016-08-23 Hao Chen , Qi Dou , Lequan Yu , Pheng-Ann Heng

Hybrid volumetric medical image segmentation models, combining the advantages of local convolution and global attention, have recently received considerable attention. While mainly focusing on architectural modifications, most existing…

Image and Video Processing · Electrical Eng. & Systems 2024-04-04 Shahina Kunhimon , Abdelrahman Shaker , Muzammal Naseer , Salman Khan , Fahad Shahbaz Khan

Volumetric medical image segmentation is a fundamental problem in medical image analysis where the objective is to accurately classify a given 3D volumetric medical image with voxel-level precision. In this work, we propose a novel…

Image and Video Processing · Electrical Eng. & Systems 2024-10-22 Daniya Najiha Abdul Kareem , Mustansar Fiaz , Noa Novershtern , Jacob Hanna , Hisham Cholakkal