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Attention mechanisms have been widely used to capture long-range dependencies among nodes in Graph Transformers. Bottlenecked by the quadratic computational cost, attention mechanisms fail to scale in large graphs. Recent improvements in…

Machine Learning · Computer Science 2024-02-02 Chloe Wang , Oleksii Tsepa , Jun Ma , Bo Wang

Graph Neural Networks (GNNs) have shown great success in various graph-based learning tasks. However, it often faces the issue of over-smoothing as the model depth increases, which causes all node representations to converge to a single…

Machine Learning · Computer Science 2026-04-13 Xin He , Yili Wang , Wenqi Fan , Xu Shen , Xin Juan , Rui Miao , Xin Wang

Dynamic graph embedding has emerged as an important technique for modeling complex time-evolving networks across diverse domains. While transformer-based models have shown promise in capturing long-range dependencies in temporal graph data,…

Machine Learning · Computer Science 2025-05-13 Ashish Parmanand Pandey , Alan John Varghese , Sarang Patil , Mengjia Xu

Machine learning on graphs has recently found extensive applications across domains. However, the commonly used Message Passing Neural Networks (MPNNs) suffer from limited expressive power and struggle to capture long-range dependencies.…

Machine Learning · Computer Science 2024-10-07 Yinan Huang , Siqi Miao , Pan Li

We propose a heterogeneous graph mamba network (HGMN) as the first exploration in leveraging the selective state space models (SSSMs) for heterogeneous graph learning. Compared with the literature, our HGMN overcomes two major challenges:…

Machine Learning · Computer Science 2024-05-24 Zhenyu Pan , Yoonsung Jeong , Xiaoda Liu , Han Liu

State Space Models (SSMs)-most notably RNNs-have historically played a central role in sequential modeling. Although attention mechanisms such as Transformers have since dominated due to their ability to model global context, their…

Computer Vision and Pattern Recognition · Computer Science 2025-10-02 Hyun-kyu Ko , Youbin Kim , Jihyeon Park , Dongheok Park , Gyeongjin Kang , Wonjun Cho , Hyung Yi , Eunbyung Park

Graph Mamba, a powerful graph embedding technique, has emerged as a cornerstone in various domains, including bioinformatics, social networks, and recommendation systems. This survey represents the first comprehensive study devoted to Graph…

Machine Learning · Computer Science 2024-12-25 Safa Ben Atitallah , Chaima Ben Rabah , Maha Driss , Wadii Boulila , Anis Koubaa

Mainstream approaches to spectral reconstruction (SR) primarily focus on designing Convolution- and Transformer-based architectures. However, CNN methods often face challenges in handling long-range dependencies, whereas Transformers are…

Computer Vision and Pattern Recognition · Computer Science 2024-10-10 Xinying Wang , Zhixiong Huang , Sifan Zhang , Jiawen Zhu , Paolo Gamba , Lin Feng

Graph neural networks (GNNs) have been widely used in representation learning on graphs and achieved state-of-the-art performance in tasks such as node classification and link prediction. However, most existing GNNs are designed to learn…

Machine Learning · Computer Science 2020-02-06 Seongjun Yun , Minbyul Jeong , Raehyun Kim , Jaewoo Kang , Hyunwoo J. Kim

Graph Neural Networks based on the message-passing (MP) mechanism are a dominant approach for handling graph-structured data. However, they are inherently limited to modeling only pairwise interactions, making it difficult to explicitly…

Machine Learning · Computer Science 2024-09-19 Marco Montagna , Simone Scardapane , Lev Telyatnikov

Graph Neural Networks (GNNs) have been widely applied to various fields due to their powerful representations of graph-structured data. Despite the success of GNNs, most existing GNNs are designed to learn node representations on the fixed…

Machine Learning · Computer Science 2021-06-14 Seongjun Yun , Minbyul Jeong , Sungdong Yoo , Seunghun Lee , Sean S. Yi , Raehyun Kim , Jaewoo Kang , Hyunwoo J. Kim

We propose Scalable Message Passing Neural Networks (SMPNNs) and demonstrate that, by integrating standard convolutional message passing into a Pre-Layer Normalization Transformer-style block instead of attention, we can produce…

Machine Learning · Computer Science 2026-03-11 Haitz Sáez de Ocáriz Borde , Artem Lukoianov , Anastasis Kratsios , Michael Bronstein , Xiaowen Dong

Graph neural networks (GNNs) have become the state of the art for various graph-related tasks and are particularly prominent in heterogeneous graphs (HetGs). However, several issues plague this paradigm: first, the difficulty in fully…

Machine Learning · Computer Science 2025-02-25 Xuqi Mao , Zhenying He , X. Sean Wang

Dynamic graphs exhibit intertwined spatio-temporal evolutionary patterns, widely existing in the real world. Nevertheless, the structure incompleteness, noise, and redundancy result in poor robustness for Dynamic Graph Neural Networks…

Machine Learning · Computer Science 2024-12-20 Haonan Yuan , Qingyun Sun , Zhaonan Wang , Xingcheng Fu , Cheng Ji , Yongjian Wang , Bo Jin , Jianxin Li

Spatial Message Passing Graph Neural Networks (MPGNNs) are widely used for learning on graph-structured data. However, key limitations of l-step MPGNNs are that their "receptive field" is typically limited to the l-hop neighborhood of a…

Machine Learning · Computer Science 2024-06-04 Simon Geisler , Arthur Kosmala , Daniel Herbst , Stephan Günnemann

Spatial-Temporal Graph (STG) data is characterized as dynamic, heterogenous, and non-stationary, leading to the continuous challenge of spatial-temporal graph learning. In the past few years, various GNN-based methods have been proposed to…

Machine Learning · Computer Science 2024-05-21 Lincan Li , Hanchen Wang , Wenjie Zhang , Adelle Coster

State space models (SSMs) have recently emerged for modeling long-range dependency in sequence data, with much simplified computational costs than modern alternatives, such as transformers. Advancing SMMs to graph structured data,…

Machine Learning · Computer Science 2026-02-23 Jiajun Shen , Yufei Jin , Yi He , xingquan Zhu

The recent success of State-Space Models (SSMs) in sequence modeling has motivated their adaptation to graph learning, giving rise to Graph State-Space Models (GSSMs). However, existing GSSMs operate by applying SSM modules to sequences…

Machine Learning · Computer Science 2026-05-27 Andrea Ceni , Alessio Gravina , Claudio Gallicchio , Davide Bacciu , Carola-Bibiane Schonlieb , Moshe Eliasof

Graph Neural Networks (GNNs) have become the state-of-the-art method for many applications on graph structured data. GNNs are a model for graph representation learning, which aims at learning to generate low dimensional node embeddings that…

Machine Learning · Computer Science 2022-05-23 Davide Buffelli , Fabio Vandin

Graph neural networks (GNNs) have been predominantly driven by message-passing, where node representations are iteratively updated via local neighborhood aggregation. Despite their success, message-passing suffers from fundamental…

Machine Learning · Computer Science 2025-12-16 Zehong Wang , Zheyuan Zhang , Tianyi Ma , Chuxu Zhang , Yanfang Ye
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