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Compact and I/O-efficient data representations play an important role in efficient algorithm design, as memory bandwidth and latency can present a significant performance bottleneck, slowing the computation by orders of magnitude. While…

Data Structures and Algorithms · Computer Science 2018-11-19 Tomáš Gavenčiak , Jakub Tětek

Neighborhood graphs are gaining popularity as a concise data representation in machine learning. However, naive graph construction by pairwise distance calculation takes $O(n^2)$ runtime for $n$ data points and this is prohibitively slow…

Data Structures and Algorithms · Computer Science 2009-04-22 Takeaki Uno , Masashi Sugiyama , Koji Tsuda

This work presents Squeeze, an efficient compact fractal processing scheme for tensor core GPUs. By combining discrete-space transformations between compact and expanded forms, one can do data-parallel computation on a fractal with…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-01-04 Felipe A. Quezada , Cristóbal A. Navarro , Nancy Hitschfeld , Benjamin Bustos

We present efficient algorithms to build data structures and the lists needed for fast multipole methods. The algorithms are capable of being efficiently implemented on both serial, data parallel GPU and on distributed architectures. With…

Mathematical Software · Computer Science 2013-01-10 Qi Hu , Nail A. Gumerov , Ramani Duraiswami

Graphs are a basic tool for the representation of modern data. The richness of the topological information contained in a graph goes far beyond its mere interpretation as a one-dimensional simplicial complex. We show how topological…

Combinatorics · Mathematics 2018-10-11 Mattia G. Bergomi , Massimo Ferri , Lorenzo Zuffi

Simplicial partitions are a fundamental structure in computational geometry, as they form the basis of optimal data structures for range searching and several related problems. Current algorithms are built on very specific spatial…

Computational Geometry · Computer Science 2025-01-15 Mónika Csikós , Alexandre Louvet , Nabil Mustafa

Topological deep learning is a rapidly growing field that pertains to the development of deep learning models for data supported on topological domains such as simplicial complexes, cell complexes, and hypergraphs, which generalize many…

This article presents a novel and succinct algorithmic framework via alternating quantum walks, unifying quantum spatial search, state transfer and uniform sampling on a large class of graphs. Using the framework, we can achieve exact…

Quantum Physics · Physics 2025-04-22 Qingwen Wang , Ying Jiang , Lvzhou Li

Graph neural networks are widely used in machine learning applied to chemistry, and in particular for material science discovery. For crystalline materials, however, generating graph-based representation from geometrical information for…

Materials Science · Physics 2023-07-12 Astrid Klipfel , Yaël Frégier , Adlane Sayede , Zied Bouraoui

Diffusion models form an important class of generative models today, accounting for much of the state of the art in cutting edge AI research. While numerous extensions beyond image and video generation exist, few of such approaches address…

Machine Learning · Computer Science 2025-04-30 Hao Luan , See-Kiong Ng , Chun Kai Ling

We propose representation of configurational physical quantities and microscopic structures for multicomponent system on lattice, by extending a concept of generalized Ising model (GIM) to graph theory. We construct graph Laplacian (and…

Disordered Systems and Neural Networks · Physics 2018-03-12 Koretaka Yuge

Large scale graph processing using distributed computing frameworks is becoming pervasive and efficient in the industry. In this work, we present a highly scalable and configurable distributed algorithm for building connected components,…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-26 Saigopal Thota , Mridul Jain , Nishad Kamat , Saikiran Malikireddy , Pruthvi Raj Eranti , Albin Kuruvilla

Graphs are a natural representation for systems based on relations between connected entities. Combinatorial optimization problems, which arise when considering an objective function related to a process of interest on discrete structures,…

Machine Learning · Computer Science 2024-08-21 Victor-Alexandru Darvariu , Stephen Hailes , Mirco Musolesi

Folding is emerging as a promising manufacturing process to transform flat materials into functional structures, offering efficiency by reducing the need for welding, gluing, and molding, while minimizing waste and enabling automation.…

Soft Condensed Matter · Physics 2025-10-20 João C. Neves , Bernardo R. Marques , Cristóvão S. Dias , Nuno A. M. Araújo

Generative models have emerged as powerful tools for planning, with compositional approaches offering particular promise for modeling long-horizon task distributions by composing together local, modular generative models. This compositional…

Robotics · Computer Science 2026-01-06 Utkarsh A Mishra , David He , Yongxin Chen , Danfei Xu

The Constraint Shortest Path (CSP) problem is as follows. An $n$-vertex graph is given, each edge/arc assigned two weights. Let us call them "cost" and "length" for definiteness. Finding a min-cost upper-bounded length path between a given…

Data Structures and Algorithms · Computer Science 2022-04-12 Adil Erzin , Roman Plotnikov , Ilya Ladygin

This paper addresses the challenge of object-centric layout generation under spatial constraints, seen in multiple domains including floorplan design process. The design process typically involves specifying a set of spatial constraints…

Computer Vision and Pattern Recognition · Computer Science 2024-04-02 Mohammed Haroon Dupty , Yanfei Dong , Sicong Leng , Guoji Fu , Yong Liang Goh , Wei Lu , Wee Sun Lee

This article explores the integration of deep learning models into combinatorial optimization pipelines, specifically targeting NP-hard problems. Traditional exact algorithms for such problems often rely on heuristic criteria to guide the…

Machine Learning · Computer Science 2026-04-28 Lorenzo Sciandra , Roberto Esposito , Andrea Cesare Grosso , Laura Sacerdote , Cristina Zucca

Pregel's vertex-centric model allows us to implement many interesting graph algorithms, where optimization plays an important role in making it practically useful. Although many optimizations have been developed for dealing with different…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-11-06 Yongzhe Zhang , Zhenjiang Hu

Flexible duplex networks allow users to dynamically employ uplink and downlink channels without static time scheduling, thereby utilizing the network resources efficiently. This work investigates the sum-rate maximization of flexible duplex…

Networking and Internet Architecture · Computer Science 2023-03-16 Tharaka Perera , Saman Atapattu , Yuting Fang , Prathapasinghe Dharmawansa , Jamie Evans
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