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We study active agents embedded in bulk or in confinement explicitly considering hydrodynamics and simulating the swimmers via an implementation inspired by the squirmer model. We develop a Dissipative Particle Dynamics scheme for the…

Translational diffusion coefficients are routinely estimated from molecular dynamics simulations. Linear fits to mean squared displacement (MSD) curves have become the de facto standard, from simple liquids to complex biomacromolecules.…

Computational Physics · Physics 2020-11-20 Jakob Tómas Bullerjahn , Sören von Bülow , Gerhard Hummer

Dynamic rupture propagation along an interface between two different elastic solids under shear dominated loading is studied numerically by a 2-D lattice particle model (LPM). The configuration of the lattice particle model consists of two…

Geophysics · Physics 2008-07-21 Baoping Shi , Yanheng Li

This paper proposes and validates two new particle regularization techniques for the Smoothed Particle Hydrodynamics (SPH) numerical method to improve its stability and accuracy for free surface flow simulations. We introduce a general form…

Fluid Dynamics · Physics 2022-04-05 Mojtaba Jandaghian , Herman Musumari Siaben , Ahmad Shakibaeinia

Various microphysical models attempt to explain the occurrence of broad droplet size distributions (DSD) in clouds through approximate representations of the stochastic droplet growth by condensation in a turbulent environment. This work…

Fluid Dynamics · Physics 2025-01-16 G. C. Abade

Diffusion models have emerged as powerful generative tools for modeling complex data distributions, yet their purely data-driven nature limits applicability in practical engineering and scientific problems where physical laws need to be…

We review and compare numerical methods that simultaneously control temperature while preserving the momentum, a family of particle simulation methods commonly used for the modelling of complex fluids and polymers. The class of methods…

Computational Physics · Physics 2020-02-14 Benedict Leimkuhler , Xiaocheng Shang

Despite the recent visually-pleasing results achieved, the massive computational cost has been a long-standing flaw for diffusion probabilistic models (DPMs), which, in turn, greatly limits their applications on resource-limited platforms.…

Computer Vision and Pattern Recognition · Computer Science 2022-12-01 Xingyi Yang , Daquan Zhou , Jiashi Feng , Xinchao Wang

The hydrodynamics of viscoelastic materials (for example polymer melts and solutions) presents interesting and complex phenomena, for example instabilities and turbulent flow at very low Reynolds numbers due to normal stress effects and the…

Soft Condensed Matter · Physics 2007-05-23 Ellak Somfai , Alexander N. Morozov , Wim van Saarloos

Nonequilibrium molecular dynamics simulations are used to study the deformation behavior of disperse polymer melts by tracking test chains of length N = Mw, the weight average molecular weight, in melts of varying dispersity. At high strain…

Soft Condensed Matter · Physics 2025-07-29 Taofeek Tejuosho , Janani Sampath

Neural networks offer highly expressive turbulence closures, yet their complexity obscures the physical mechanisms they aim to model, and their computational cost can limit their tractability. To address these limitations, we introduce a…

Fluid Dynamics · Physics 2026-04-29 Samantha Friess , Aviral Prakash , John A. Evans

We present a multiscale simulation algorithm for amorphous materials, which we illustrate and validate in a canonical case of dense granular flow. Our algorithm is based on the recently proposed Spot Model, where particles in a dense random…

Soft Condensed Matter · Physics 2009-11-11 Chris H. Rycroft , Martin Z. Bazant , Gary S. Grest , James W. Landry

Rotating turbulent flows form a challenging test case for large-eddy simulation (LES). We, therefore, propose and validate a new subgrid-scale (SGS) model for such flows. The proposed SGS model consists of a dissipative eddy viscosity term…

Fluid Dynamics · Physics 2019-04-30 Maurits H. Silvis , H. Jane Bae , F. Xavier Trias , Mahdi Abkar , Roel Verstappen

We have employed the multiple image method to compute the interparticle force for a polydisperse electrorheological (ER) fluid in which the suspended particles can have various sizes and different permittivites. The point-dipole (PD)…

Soft Condensed Matter · Physics 2007-05-23 Y. L. Siu , Jones T. K. Wan , K. W. Yu

The viscosity and self-diffusion constant of a mesoscale hydrodynamic method, dissipative particle dynamics (DPD), are investigated. The viscosity of DPD with finite time step, including the Lowe-Anderson thermostat, is derived analytically…

Soft Condensed Matter · Physics 2009-11-13 Hiroshi Noguchi , Gerhard Gompper

System dynamics (SD) is an effective approach for helping reveal the temporal behavior of complex systems. Although there have been recent developments in expanding SD to include systems' spatial dependencies, most applications have been…

Computational Engineering, Finance, and Science · Computer Science 2015-06-03 Christian Neuwirth , Angela Peck , Slobodan Simonovic

We perform direct numerical simulations (DNSs) of emulsions in homogeneous, isotropic turbulence using a pseudopotential lattice-Boltzmann (PP-LB) method. Improving on previous literature by minimizing droplet dissolution and spurious…

Discrete particle simulations have become the standard in science and industrial applications exploring the properties of particulate systems. Most of such simulations rely on the concept of interacting spherical particles to describe the…

Numerical Analysis · Mathematics 2023-11-01 Igor Ostanin , Vasileios Angelidakis , Timo Plath , Sahar Pourandi , Anthony Thornton , Thomas Weinhart

We use Langevin dynamics (LD) simulations to investigate single-file diffusion (SFD) in a dilute solution of flexible linear polymers inside a narrow tube with periodic boundary conditions (a torus). The transition from SFD, where the time…

Soft Condensed Matter · Physics 2025-05-20 Hanyang Wang , Gary W. Slater

We have designed 3D numerical simulations of a soft spheres model, with size polidispersity and in athermal conditions, to study the transient shear banding that occurs during yielding of jammed soft solids. We analyze the effects of…

Soft Condensed Matter · Physics 2020-07-15 Vishwas V. Vasisht , Emanuela Del Gado