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The Aho, Hopcroft and Ullman (AHU) algorithm has been the state of the art since the 1970s for determining in linear time whether two unordered rooted trees are isomorphic or not. However, it has been criticized (by Campbell and Radford)…

Data Structures and Algorithms · Computer Science 2024-02-13 Florian Ingels

The graph isomorphism problem is theoretically interesting and also has many practical applications. The best known classical algorithms for graph isomorphism all run in time super-polynomial in the size of the graph in the worst case. An…

Quantum Physics · Physics 2011-04-26 David Rosenbaum

Circular-arc graphs are intersection graphs of arcs on the circle. The aim of our work is to present a polynomial time algorithm testing whether two circular-arc graphs are isomorphic. To accomplish our task we construct decomposition…

Data Structures and Algorithms · Computer Science 2019-07-16 Tomasz Krawczyk

This paper presents the novel `uniqueness tree' algorithm, as one possible method for determining whether two finite, undirected graphs are isomorphic. We prove that the algorithm has polynomial time complexity in the worst case, and that…

Discrete Mathematics · Computer Science 2016-06-22 Jonathan Gorard

Pedigree graphs, or family trees, are typically constructed by an expensive process of examining genealogical records to determine which pairs of individuals are parent and child. New methods to automate this process take as input genetic…

Data Structures and Algorithms · Computer Science 2011-10-19 Bonnie Kirkpatrick , Yakir Reshef , Hilary Finucane , Haitao Jiang , Binhai Zhu , Richard M. Karp

The computational complexity of the graph isomorphism problem is considered to be a major open problem in theoretical computer science. It is known that testing isomorphism of chordal graphs is polynomial-time equivalent to the general…

Data Structures and Algorithms · Computer Science 2022-02-16 Vikraman Arvind , Roman Nedela , Ilia Ponomarenko , Peter Zeman

In recent years many algorithms have been developed for finding patterns in graphs and networks. A disadvantage of these algorithms is that they use subgraph isomorphism to determine the support of a graph pattern; subgraph isomorphism is a…

Data Structures and Algorithms · Computer Science 2015-03-19 Anton Dries , Siegfried Nijssen

The Subgraph Isomorphism problem is of considerable importance in computer science. We examine the problem when the pattern graph H is of bounded treewidth, as occurs in a variety of applications. This problem has a well-known algorithm via…

Data Structures and Algorithms · Computer Science 2021-05-12 Karl Bringmann , Jasper Slusallek

The Subtree Isomorphism problem asks whether a given tree is contained in another given tree. The problem is of fundamental importance and has been studied since the 1960s. For some variants, e.g., ordered trees, near-linear time algorithms…

Computational Complexity · Computer Science 2015-10-16 Amir Abboud , Arturs Backurs , Thomas Dueholm Hansen , Virginia Vassilevska Williams , Or Zamir

We give a fixed-parameter tractable algorithm that, given a parameter $k$ and two graphs $G_1,G_2$, either concludes that one of these graphs has treewidth at least $k$, or determines whether $G_1$ and $G_2$ are isomorphic. The running time…

Data Structures and Algorithms · Computer Science 2014-12-11 Daniel Lokshtanov , Marcin Pilipczuk , Michał Pilipczuk , Saket Saurabh

Individualization-Refinement (IR) algorithms form the standard method and currently the only practical method for symmetry computations of graphs and combinatorial objects in general. Through backtracking, on each graph an IR-algorithm…

Data Structures and Algorithms · Computer Science 2021-09-16 Markus Anders , Jendrik Brachter , Pascal Schweitzer

Determining whether two graphs are structurally identical is a fundamental problem with applications spanning mathematics, computer science, chemistry, and network science. Despite decades of study, graph isomorphism remains a challenging…

Computational Physics · Physics 2026-04-10 Sara Najem , Amer E. Mouawad

Graph canonization is the problem of computing a unique representative, a canon, from the isomorphism class of a given graph. This implies that two graphs are isomorphic exactly if their canons are equal. We show that graphs of bounded tree…

Computational Complexity · Computer Science 2015-06-26 Michael Elberfeld , Pascal Schweitzer

The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…

Data Structures and Algorithms · Computer Science 2016-08-23 Andre Droschinsky , Nils M. Kriege , Petra Mutzel

An $H$-graph is an intersection graph of connected subgraphs of a suitable subdivision of a fixed graph $H$. Many important classes of graphs, including interval graphs, circular-arc graphs, and chordal graphs, can be expressed as…

Data Structures and Algorithms · Computer Science 2022-06-28 Deniz Ağaoğlu Çağırıcı , Peter Zeman

A widely used method for determining the similarity of two labeled trees is to compute a maximum agreement subtree of the two trees. Previous work on this similarity measure is only concerned with the comparison of labeled trees of two…

Computer Vision and Pattern Recognition · Computer Science 2007-05-23 Ming-Yang Kao , Tak-Wah Lam , Wing-Kin Sung , Hing-Fung Ting

For every integer $g$, isomorphism of graphs of Euler genus at most $g$ can be decided in linear time. This improves previously known algorithms whose time complexity is $n^{O(g)}$ (shown in early 1980's), and in fact, this is the first…

Data Structures and Algorithms · Computer Science 2015-11-10 Ken-ichi Kawarabayashi

The Graph Isomorphism problem restricted to graphs of bounded treewidth or bounded tree distance width are known to be solvable in polynomial time [Bod90],[YBFT99]. We give restricted space algorithms for these problems proving the…

Computational Complexity · Computer Science 2010-02-03 Bireswar Das , Jacobo Toran , Fabian Wagner

Circular-arc graphs are the intersection graphs of arcs of a circle. The main result of this work describes the structure of all \emph{normalized intersection models} of circular-arc graphs. Normalized models of a circular-arc graph reflect…

Data Structures and Algorithms · Computer Science 2024-11-28 Tomasz Krawczyk

In the past decades for more and more graph classes the Graph Isomorphism Problem was shown to be solvable in polynomial time. An interesting family of graph classes arises from intersection graphs of geometric objects. In this work we show…

Data Structures and Algorithms · Computer Science 2016-06-23 Daniel Neuen
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