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Related papers: Topological defects in multi-layered swarming bact…

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We show that back-flow, the coupling between the order parameter and the velocity fields, has a significant effect on the motion of defects in nematic liquid crystals. In particular the defect speed can depend strongly on the topological…

Soft Condensed Matter · Physics 2007-05-23 Geza Toth , Colin Denniston , Julia M. Yeomans

Active matter refers to a broad class of non-equilibrium systems where energy is continuously injected at the level of individual ``particles". These systems exhibit emergent collective behaviors that have no direct thermal-equilibrium…

Soft Condensed Matter · Physics 2026-02-10 Zihan Zheng , Cunyuan Jiang , Yangrui Chen , Matteo Baggioli , Jie Zhang

Morphogenesis emerges from dynamic feedback among geometry, mechanics, and chemistry; however, disentangling these contributions in living systems remains challenging. Here, we focus on the interplay between geometry and mechanics by…

We describe a numerical investigation of a continuum model of an active nematic, concentrating on the regime of active turbulence. Results are presented for the effect of three parameters, activity, elastic constant and rotational diffusion…

Soft Condensed Matter · Physics 2015-06-18 Sumesh P. Thampi , Ramin Golestanian , Julia M. Yeomans

Topological defects are increasingly being identified in various biological systems, where their characteristic flow fields and stress patterns are associated with continuous active stress generation by biological entities. Here, using…

Soft Condensed Matter · Physics 2022-11-09 Lasse Bonn , Aleksandra Ardaseva , Romain Mueller , Tyler N. Shendruk , Amin Doostmohammadi

Motivated by recent experiments on the rod-like virus bacteriophage fd, confined to circular and annular domains, we present a theoretical study of structural transitions in these geometries. Using the continuum theory of nematic liquid…

Soft Condensed Matter · Physics 2015-08-14 O. V. Manyuhina , K. B. Lawlor , M. C. Marchetti , M. J. Bowick

Living materials at different length scales manifest active nematic features such as orientational order, nematic topological defects, and active nematic turbulence. Using numerical simulations we investigate the impact of fluid inertia on…

Soft Condensed Matter · Physics 2022-08-10 Roozbeh Saghatchi , Mehmet Yildiz , Amin Doostmohammadi

Active nematics are dense systems of rodlike particles that consume energy to drive motion at the level of the individual particles. They exist in natural systems like biological tissues and artificial materials such as suspensions of…

Soft Condensed Matter · Physics 2023-12-14 Yunrui Li , Zahra Zarei , Phu N. Tran , Yifei Wang , Aparna Baskaran , Seth Fraden , Michael F. Hagan , Pengyu Hong

We present the hydrodynamic theory of coherent collective motion ("flocking") at a solid-liquid interface, and many of its predictions for experiment. We find that such systems are stable, and have long-range orientational order, over a…

Soft Condensed Matter · Physics 2022-01-05 Niladri Sarkar , Abhik Basu , John Toner

We numerically investigate how spatial variations of extensile or contractile active stress affect bulk active nematic systems in two and three dimensions. In the absence of defects, activity gradients drive flows which re-orient the…

Soft Condensed Matter · Physics 2022-06-15 Liam J Ruske , Julia M Yeomans

In this paper we rigorously investigate the emergence of defects on Nematic Shells with genus different from one. This phenomenon is related to a non trivial interplay between the topology of the shell and the alignment of the director…

Analysis of PDEs · Mathematics 2017-03-17 Giacomo Canevari , Antonio Segatti

The spontaneous emergence of collective flows is a generic property of active fluids and often leads to chaotic flow patterns characterised by swirls, jets, and topological disclinations in their orientation field. However, the ability to…

Soft Condensed Matter · Physics 2017-03-07 Tyler N. Shendruk , Amin Doostmohammadi , Kristian Thijssen , Julia M. Yeomans

The field of active matter explores the behaviors of self propelled agents out of equilibrium, with active suspensions, such as swimming bacteria in solutions, serving as impactful models. These systems exhibit spatio-temporal patterns akin…

Soft Condensed Matter · Physics 2025-08-26 Pratikshya Jena , Shradha Mishra

Active matter often simultaneously exhibits different kinds of orientational order and, in many cases of biological interest, undergoes continuous material renewal. In renewing nematopolar fluids we find stable topological strings,…

Soft Condensed Matter · Physics 2026-01-27 Alberto Dinelli , Ludovic Dumoulin , Karsten Kruse

Liquid crystals inevitably possess topological defect excitations generated through boundary conditions, applied fields or in quenches to the ordered phase. In equilibrium pairs of defects coarsen and annihilate as the uniform ground state…

Soft Condensed Matter · Physics 2013-06-05 Luca Giomi , Mark J. Bowick , Xu Ma , M. Cristina Marchetti

We develop a continuum theory to describe the collective dynamics of deformable epithelial cells, using two tensor order parameters to distinguish the force-generating active filaments in the cells from their shape. The theory demonstrates…

Soft Condensed Matter · Physics 2025-01-13 Mehrana R. Nejad , Julia M. Yeomans , Sumesh P Thampi

Active turbulence arises typically in systems ranging from microorganisms and biopolymers to synthetic colloids, where chaotic flows are closely associated with motile topological defects in collectively swarming suspensions. Here, we…

Soft Condensed Matter · Physics 2026-04-27 Prince Vibek Baruah , Nadia Bihari Padhan , Biswajit Maji , Rahul Pandit , Prerna Sharma

Rod-shaped bacteria, such as Escherichia coli, commonly live forming mounded colonies. They initially grow two-dimensionally on a surface and finally achieve three-dimensional growth. While it was recently reported that three-dimensional…

Soft Condensed Matter · Physics 2022-12-23 Takuro Shimaya , Kazumasa A. Takeuchi

Nematic liquid crystals can dramatically reconfigure under dynamic forcing, providing exciting opportunities in active matter. Here, we study a hybrid disk colloid rotated by an external field which generates a dynamic companion topological…

Soft Condensed Matter · Physics 2026-05-26 Qi Xing Zhang , Claire Dore , Mojtaba Rajabi , Edward B. Steager , Kathleen J. Stebe

Over the past few decades, the research community has been interested in the study of multi-agent systems and their emerging collective dynamics. These systems are all around us in nature, like bacterial colonies, fish schools, bird flocks,…

Adaptation and Self-Organizing Systems · Physics 2023-12-12 Gourab Kumar Sar , Dibakar Ghosh
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