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Related papers: Environment-stored memory in active nematics and e…

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Bacteria possess diverse mechanisms to regulate their motility in response to environmental and physiological signals, enabling them to navigate complex habitats and adapt their behavior. Among these mechanisms, interspecies recognition…

Populations and Evolution · Quantitative Biology 2025-12-01 Mattia Mattei , David Soriano Paños , Mahantesh Halappanavar , Alex Arenas

Active materials are capable of converting free energy into directional motion, giving rise to striking dynamical phenomena. Developing a general understanding of their structure in relation to the underlying non-equilibrium physics would…

Soft Condensed Matter · Physics 2018-10-17 Nitin Kumar , Rui Zhang , Juan J. de Pablo , Margaret L. Gardel

We study a minimal model of a system with coexisting nematic and polar orientational orders, where one field tends to order and the other prefers isotropy. For strong coupling, the ordered field aligns the isotropic one, locking their…

Soft Condensed Matter · Physics 2025-01-10 Farzan Vafa , Amin Doostmohammadi

This work focuses on the training dynamics of one associative memory module storing outer products of token embeddings. We reduce this problem to the study of a system of particles, which interact according to properties of the data…

Machine Learning · Computer Science 2024-03-01 Vivien Cabannes , Berfin Simsek , Alberto Bietti

Most field theories for active matter neglect effects of memory and inertia. However, recent experiments have found inertial delay to be important for the motion of self-propelled particles. A major challenge in the theoretical description…

Soft Condensed Matter · Physics 2021-06-15 Michael te Vrugt , Julian Jeggle , Raphael Wittkowski

Neural networks powered with external memory simulate computer behaviors. These models, which use the memory to store data for a neural controller, can learn algorithms and other complex tasks. In this paper, we introduce a new memory to…

Neural and Evolutionary Computing · Computer Science 2019-12-30 Hung Le , Truyen Tran , Svetha Venkatesh

The alignment of fibers and cells in living tissues affect their mechanical properties and functionality. In this context, one can draw an analogy between tissues and nematic liquid crystal elastomers. We explore this analogy by growing…

Soft Condensed Matter · Physics 2025-10-08 Kirsten Endresen , Aniruddh Murali , Birte Geerds , Daniel J. G. Pearce , Francesca Serra

Cellular renewing active matter - assemblies of proliferating and apoptotic cells - underlies tissue homeostasis, morphogenesis, and clonal competition. Previous work in one-dimensional periodic systems identified a fitness advantage…

Soft Condensed Matter · Physics 2025-12-02 Patrick Zimmer , Philip Bittihn , Yoav G. Pollack

Interaction of electric fields with biological cells is indispensable for many physiological processes. Thermal electrical noise in the cellular environment has long been considered as the minimum threshold for detection of electrical…

Soft Condensed Matter · Physics 2026-02-24 Anand Mathew , Yashashree Kulkarni

Amorphous magnetic solids, like metallic glasses, exhibit a novel effect: the growth of magnetic order as a function of mechanical strain under athermal conditions in the presence of a magnetic field. The magnetic moment increases in steps…

Soft Condensed Matter · Physics 2014-03-05 H. George E. Hentschel , Itamar Procaccia , Bhaskar Sen Gupta

In cellular reprogramming, almost all epigenetic memories of differentiated cells are erased by the overexpression of few genes, regaining pluripotency, potentiality for differentiation. Considering the interplay between oscillatory gene…

Biological Physics · Physics 2021-09-14 Yuuki Matsushita , Tetsuhiro S. Hatakeyama , Kunihiko Kaneko

Biological tissues exhibit diverse mechanical and rheological behaviors during morphogenesis. While much is known about tissue phase transitions controlled by structural order and cell mechanics, key questions regarding how tissue-scale…

Soft Condensed Matter · Physics 2026-04-29 Pengyu Yu , Fridtjof Brauns , M. Cristina Marchetti

Transformative innovations in model architectures have introduced hierarchical embedding augmentation as a means to redefine the representation of tokens through multi-level semantic structures, offering enhanced adaptability to complex…

Computation and Language · Computer Science 2025-08-11 Derek Yotheringhay , Alistair Kirkland , Humphrey Kirkbride , Josiah Whitesteeple

Collagen fibers, an important component of the extracellular matrix (ECM), can both inhibit and promote cellular migration. {\it In-vitro} studies have revealed that the fibers' orientations are crucial to cellular invasion, while {\it…

Cell Behavior · Quantitative Biology 2019-07-01 Youness Azimzade , Abbas Ali Saberi , Muhammad Sahimi

A surface in contact with the isotropic phase of a passive liquid crystal can induce nematic order over distances that range from microscopic to macroscopic when the nematic-isotropic interface undergoes an orientational-wetting transition.…

Soft Condensed Matter · Physics 2024-03-18 Rodrigo C. V. Coelho , José A. Moreira , Duarte M. C. Pedro , Margarida M. Telo da Gama

Cells undergo dramatic morphological changes during embryogenesis, yet how these changes affect the formation of ordered tissues remains elusive. Here, we show that a phase transition leading to the formation of a nematic liquid crystal…

Compliant environments can mediate interactions between mechanically active cells like fibroblasts. Starting with a phenomenological model for the behaviour of single cells, we use extensive Monte Carlo simulations to predict non-trivial…

Soft Condensed Matter · Physics 2007-05-23 I. B. Bischofs , U. S. Schwarz

Living cells respond to mechanical changes in the matrix surrounding them by applying contractile forces that are in turn transmitted to distant cells. We calculate the mechanical work that each cell performs in order to deform the matrix,…

Soft Condensed Matter · Physics 2021-08-17 Chaviva Sirote , Yair Shokef

We show that "dry" active nematics, e.g. collections of shaken elongated granular particles, exhibit large-scale spatiotemporal chaos made of interacting dense, ordered, band-like structures in a parameter region including the linear onset…

Soft Condensed Matter · Physics 2014-09-16 Sandrine Ngo , Anton Peshkov , Igor S. Aranson , Eric Bertin , Francesco Ginelli , Hugues Chaté

Active particles affect their environment as much as the environment affects their active motion. Here, we present an experimental system where both can be simultaneously adjusted in situ using an external AC electric field. The environment…