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Cells and tissues exert forces and can actively change shape. This strikingly autonomous behavior is powered by the cytoskeleton, which includes an active gel of actin filaments, crosslinks, and myosin molecular motors. Although individual…

Soft Condensed Matter · Physics 2017-07-26 José Alvarado , Misha Sheinman , Abhinav Sharma , Fred C. MacKintosh , Gijsje H. Koenderink

Multistability-induced hysteresis has been widely studied in mechanical systems, but such behavior has proven more difficult to reproduce experimentally in flow networks. Natural flow networks like animal and plant vasculature can exhibit…

Soft Condensed Matter · Physics 2025-12-03 Lauren E. Altman , Nadia Aguilar , Douglas J. Durian , Miguel Ruiz-Garcia , Eleni Katifori

Mesh-like structures, such as mucus gel or cytoskeleton networks, are ubiquitous in biological systems. These intricate structures are composed of cross-linked, semi-flexible bio-filaments, crucial to numerous biological processes. In many…

Soft Condensed Matter · Physics 2024-01-10 Yeongjin Kim , Won Kyu Kim , Jae-Hyung Jeon

Vascular networks play a key role in the development, function, and survival of many organisms, facilitating transport of nutrients and other critical factors within and between systems. The development of these vessel networks has been…

Tissues and Organs · Quantitative Biology 2022-03-23 Benjamin J. Walker , Adriana T. Dawes

The mechanics of cells is strongly affected by molecular motors that generate forces in the cellular cytoskeleton. We develop a model for cytoskeletal networks driven out of equilibrium by molecular motors exerting transient contractile…

Soft Condensed Matter · Physics 2009-11-13 Fred C. MacKintosh , Alex J. Levine

Transport networks are crucial to the functioning of natural and technological systems. Nature features transport networks that are adaptive over a vast range of parameters, thus providing an impressive level of robustness in supply.…

Adaptation and Self-Organizing Systems · Physics 2017-11-28 Erik Andreas Martens , Konstantin Klemm

Tracking experiments in dense biological tissues reveal a diversity of sources f or local energy injection at the cell scale. The effect of cell motility has been largely studied, but much less is known abo ut the effect of the observed…

Soft Condensed Matter · Physics 2017-11-29 Elsen Tjhung , Ludovic Berthier

Plants create sugar in the mesophyll cells of their leaves by photosynthesis. This sugar, mostly sucrose, has to be loaded via the bundle sheath into the phloem vascular system (the sieve elements), where it is distributed to growing parts…

Biological Physics · Physics 2014-10-14 Julia Dölger , Hanna Rademaker , Johannes Liesche , Alexander Schulz , Tomas Bohr

Life and functioning of higher organisms depends on the continuous supply of metabolites to tissues and organs. What are the requirements on the transport network pervading a tissue to provide a uniform supply of nutrients, minerals, or…

Biological Physics · Physics 2018-07-09 Felix J. Meigel , Karen Alim

Plasmodium of acellular slime mould Physarum polycephalum exhibits traits of wave-like behaviour. The plasmodium's behaviour can be finely tuned in laboratory experiments by using herbal tablets. A single tablet acts as a fixed attractor:…

Pattern Formation and Solitons · Physics 2012-12-13 Andrew Adamatzky

Many cells face search problems, such as finding food, mates or shelter, where their success depends on their search strategy. In contrast to other unicellular organisms, the slime mold Physarum polycephalum forms a giant network-shaped…

Biological Physics · Physics 2024-09-20 Lucas Tröger , Florian Goirand , Karen Alim

The need for organisms to regulate their volume and osmolarity when surrounded by freshwater is a basic physical challenge for many bacteria, protists and algae. Taking inspiration from the contractile vacuole complex found in many…

Biological Physics · Physics 2024-09-24 Sami C. Al-Izzi , Matthew S. Turner , Pierre Sens

Biological transport networks are highly optimized structures that ensure power-efficient distribution of fluids across various domains, including animal vasculature and plant venation. Theoretically, these networks can be described as…

Biological Physics · Physics 2025-08-01 Albert Alonso , Lars Erik J. Skjegstad , Julius B. Kirkegaard

Mobility is a key factor in urban life and transport network plays a vital role in mobility. Worse transport network having less mobility is one of the key reasons to decline the living standard in any unplanned mega city. Transport…

Physics and Society · Physics 2023-02-01 Md. Ahsan Habib , M. A. H. Akhand

Network-forming organisms, like fungi and slime molds, dynamically reorganize their networks during foraging. The resulting re-routing of resource flows within the organism's network can significantly impact local ecosystems. In current…

Biological Physics · Physics 2024-09-02 Lisa Schick , Mirna Kramar , Karen Alim

In this work we study and expand a model describing the dynamics of a unicellular slime mold, Physarum Polycephalum (PP), which was proposed to simulate the ability of PP to find the shortest path connecting two food sources in a maze. The…

Numerical Analysis · Mathematics 2020-09-29 Enrico Facca , Franco Cardin , Mario Putti

Active materials form a class of far-from-equilibrium systems that are driven internally and exhibit self-organization which can be harnessed to perform mechanical work. Inspired by experiments on synthetic active networks we examine limits…

Soft Condensed Matter · Physics 2024-05-02 Shahriar Shadkhoo , Matt Thomson

Cytoskeletal networks, which are essentially motor-filament assemblies, play a major role in many developmental processes involving structural remodeling and shape changes. These are achieved by nonequilibrium self-organization processes…

Soft Condensed Matter · Physics 2014-12-22 Shenshen Wang , Peter G. Wolynes

Active semiflexible filaments are crucial in various biophysical processes, yet insights into their single-filament behavior have predominantly relied on theory and simulations, owing to the scarcity of controllable synthetic systems. Here,…

Soft Condensed Matter · Physics 2025-07-14 Bipul Biswas , Prasanna More , Hima Nagamanasa Kandula

Recent advances in microscopy techniques has uncovered unique aspects of flagella-driven motility in bacteria. A remarkable example is the discovery of flagellar wrapping, a phenomenon whereby a bacterium wraps its flagellum (or flagellar…

Soft Condensed Matter · Physics 2025-04-22 Takuro Kataoka , Taiju Yoneda , Daisuke Nakane , Hirofumi Wada
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