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The aim of this work is the numerical homogenization of a parabolic problem with several time and spatial scales using the heterogeneous multiscale method. We replace the actual cell problem with an alternate one, using Dirichlet boundary…

Numerical Analysis · Mathematics 2022-10-11 Daniel Eckhardt , Barbara Verfürth

In this paper, we derive analytical expressions for the leading-order hydrodynamic mobility of a small solid particle undergoing motion tangential to a nearby large spherical capsule whose membrane possesses resistance towards shearing and…

Fluid Dynamics · Physics 2017-06-07 Abdallah Daddi-Moussa-Ider , Maciej Lisicki , Stephan Gekle

Biological systems tightly regulate their physiological state using control signals. This includes the actomyosin cytoskeleton, a contractile active gel that consumes chemical free energy to drive many examples of cellular mechanical…

Soft Condensed Matter · Physics 2025-03-03 James Clarke , Francis Cavanna , Aniket Marne , Anthony Davolio , José Alvarado

Lipid membrane with freely exposed edge is regarded as smooth surface with curved boundary. Exterior differential forms are introduced to describe the surface and the boundary curve. The total free energy is defined as the sum of Helfrich's…

Soft Condensed Matter · Physics 2007-06-11 Z. C. Tu , Z. C. Ou-Yang

Cell motility is one of the most fundamental phenomena underlying biological processes that maintain living organisms alive. Here we introduce a simple model to describe the motility of cells which include not only time-correlated internal…

Biological Physics · Physics 2022-07-13 T. N. Azevedo , L. G. Rizzi

In this investigation we revisit the concept of "effective free surfaces" arising in the solution of the time-averaged fluid dynamics equations in the presence of free boundaries. This work is motivated by applications of the optimization…

Fluid Dynamics · Physics 2012-09-04 R. Yapalparvi , B. Protas

We study the regularity of free boundaries in the multiple elastic membrane problem in the plane. We prove the uniqueness of blow-ups, and that the free boundaries are $C^{1,\log}$-curves near a regular intersection point.

Analysis of PDEs · Mathematics 2021-09-22 Ovidiu Savin , Hui Yu

Some approach to the solution of boundary value problems for finding functions, which are analytical in a wedge, is proposed. If the ratio of the angle at the wedge vertex to a number \pi is rational, then the boundary value problem is…

Fluid Dynamics · Physics 2015-06-11 E. A. Karabut

This paper is concerned with a multi-dimensional free boundary problem modeling the growth of a tumor with two species of cells: proliferating cells and quiescent cells. This free boundary problem has a unique radial stationary solution. By…

Analysis of PDEs · Mathematics 2015-06-17 Shangbin Cui

The actin cytoskeleton of adherent tissue cells often condenses into filament bundles contracted by myosin motors, so-called stress fibers, which play a crucial role in the mechanical interaction of cells with their environment. Stress…

Subcellular Processes · Quantitative Biology 2015-05-27 Achim Besser , Julien Colombelli , Ernst H. K. Stelzer , Ulrich S. Schwarz

A finite-element algorithm for computing free-surface flows driven by arbitrary body forces is presented. The algorithm is primarily designed for the microfluidic parameter range where (i) the Reynolds number is small and (ii) force-driven…

Fluid Dynamics · Physics 2007-05-23 M. Schindler , P. Talkner , P. Hanggi

Living cells adapt and respond actively to the mechanical properties of their environment. In addition to biochemical mechanotransduction, evidence exists for a myosin-dependent, purely mechanical sensitivity to the stiffness of the…

In this paper we investigate a two dimensional free boundary problem involving the A-Laplacian. We show that the free boundary is represented locally by graphs of a family of continuous functions.

Analysis of PDEs · Mathematics 2019-06-28 Samia Challal , Abdeslem Lyaghfouri

We address a free boundary model for the compressible Euler equations where the free boundary, which is elastic, evolves according to a weakly damped fourth order hyperbolic equation forced by the fluid pressure. This system captures the…

Analysis of PDEs · Mathematics 2023-11-16 Igor Kukavica , Šárka Nečasová , Amjad Tuffaha

Locomotion is essential for living cells. It enables bacteria and algae to explore space for food, cancer to spread, and immune system to fight infections. Motile cells display trajectories of intriguing complexity, from regular (e.g.…

Soft Condensed Matter · Physics 2021-12-28 C. Misbah , M. S. Rizvi , W. F. Hu , T. S. Lin , S. Rafai , A. Farutin

We address a moving boundary problem that consists of a system of equations modeling an inviscid fluid interacting with a two-dimensional nonlinear Koiter plate at the boundary. We derive a priori estimates needed to prove the local-in-time…

Analysis of PDEs · Mathematics 2024-11-04 Abhishek Balakrishna , Igor Kukavica , Boris Muha , Amjad Tuffaha

A free boundary value problem related to the genesis of multispecies granular biofilms is presented. The granular biofilm is modelled as a spherical free boundary domain with radial symmetry. The proposed model is conceived in the framework…

Analysis of PDEs · Mathematics 2023-01-31 F. Russo , M. R. Mattei , A. Tenore , B. D'Acunto , V. Luongo , L. Frunzo

The amplification of an external signal is a key step in direction sensing of biological cells. We consider a simple model for the response to a time-depending signal, which was previously proposed by the last three authors. The model…

Analysis of PDEs · Mathematics 2020-06-30 Anna Logioti , Barbara Niethammer , Matthias Röger , Juan J. L. Velázquez

We consider the free boundary incompressible porous media equation which describes the dynamics of a density transported by a Darcy flow in the field of gravity, with a free boundary between the fluid region and the dry region above it. For…

Analysis of PDEs · Mathematics 2025-03-26 Mickaël Latocca , Huy Q. Nguyen

Movement within eukaryotic cells largely originates from localized forces exerted by myosin motors on scaffolds of actin filaments. Although individual motors locally exert both contractile and extensile forces, large actomyosin structures…

Biological Physics · Physics 2014-10-06 Martin Lenz