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The concentration of intracellular calcium ion (Ca$^{2+}$) exhibits complex oscillations, including bursting and chaos, as observed experimentally. These dynamics are influenced by inherent fluctuations within cells, which serve as crucial…

Adaptation and Self-Organizing Systems · Physics 2024-06-24 Athokpam Langlen Chanu , R. K. Brojen Singh , Jae-Hyung Jeon

Many cells use calcium signalling to carry information from the extracellular side of the plasma membrane to targets in their interior. Since virtually all cells employ a network of biochemical reactions for Ca2+ signalling, much effort has…

Neurons and Cognition · Quantitative Biology 2009-12-17 Maurizio De Pitta` , Vladislav Volman , Herbert Levine , Eshel Ben-Jacob

Calcium (Ca2+) plays a central role in mediating both contractile function and hypertrophic signalling in ventricular cardiomyocytes. L-type Ca2+ channels trigger release of Ca2+ from ryanodine receptors (RyRs) for cellular contraction,…

Subcellular Processes · Quantitative Biology 2020-08-18 Hilary Hunt , Agne Tilunaite , Greg Bass , Christian Soeller , H. Llewelyn Roderick , Vijay Rajagopal , Edmund J. Crampin

Recent years have witnessed an increasing interest in neuron-glia communication. This interest stems from the realization that glia participates in cognitive functions and information processing and is involved in many brain disorders and…

Neurons and Cognition · Quantitative Biology 2009-12-17 Maurizio De Pitta` , Mati Goldberg , Vladislav Volman , Hugues Berry , Eshel Ben-Jacob

The calcium (Ca$^{2+}$) signalling system is important for many cellular processes within the human body. Signals are transmitted within the cell by releasing Ca$^{2+}$ from the endoplasmic reticulum (ER) into the cytosol via clusters of…

Quantitative Methods · Quantitative Biology 2024-02-01 Molly Hawker , Pengxing Cao , James Sneyd , Ivo Siekmann

A living cell senses its environment and responds to external signals. In this work, we study theoretically, the precision at which cells can determine the position of a spatially localized transient extracellular signal. To this end, we…

Cell Behavior · Quantitative Biology 2019-09-04 Vaibhav H. Wasnik , Peter Lipp , Karsten Kruse

We examine the synchrony of the dynamics of localized [Ca^{2+}]_i oscillations in internal pool of astrocytes via diffusing coupling of a network of such cells in a certain topology where cytosolic Ca^{2+} and inositol 1,4,5-triphosphate…

Cortical neurons are subject to sustained and irregular synaptic activity which causes important fluctuations of the membrane potential (Vm). We review here different methods to characterize this activity and its impact on spike generation.…

Neurons and Cognition · Quantitative Biology 2009-04-29 Zuzanna Piwkowska , Martin Pospischil , Romain Brette , Julia Sliwa , Michelle Rudolph-Lilith , Thierry Bal , Alain Destexhe

Intracellular Ca signals represent a universal mechanism of cell function. Messages carried by Ca are local, rapid, and powerful enough to be delivered over the thermal noise. A higher signal to noise ratio is achieved by a cooperative…

Cell Behavior · Quantitative Biology 2017-07-06 Anna Maltsev , Victor Maltsev , Michael Stern

Clusters of IP3 receptor channels in the membranes of the endoplasmic reticulum (ER) of many non-excitable cells release calcium ions in a cooperative manner giving rise to dynamical patterns such as Ca2+ puffs, waves, and oscillations that…

Subcellular Processes · Quantitative Biology 2018-10-17 Svitlana Braichenko , Atul Bhaskar , Srinandan Dasmahapatra

Nonlinear systems driven by recurrent signals are known to exhibit complex dynamical responses which, in the physiological context, can have important functional consequences. One of the simplest biological systems that is exposed to such…

Subcellular Processes · Quantitative Biology 2018-07-04 Tanmay Mitra , Shakti N. Menon , Sitabhra Sinha

We focused our attention on Ca$^{2+}$ release from the endoplasmic reticulum through a cluster of inositol 1,4,5-trisphosphate (IP$_3$) receptor channels. The random opening and closing of these receptors introduce stochastic effects that…

Subcellular Processes · Quantitative Biology 2009-09-29 Luis Diambra

The analysis of variations in the emission intensity of the pulsar B0950+08 from 2014 to 2022 with scales from minutes to years was carried out. The observations were obtained in a round-the-clock daily survey conducted on the Large Phased…

High Energy Astrophysical Phenomena · Physics 2025-03-19 T. V. Smirnova , M. O. Toropov , S. A. Tyul'bashev

Deciphering the complex interactions between neurotransmission and astrocytic $Ca^{2+}$ elevations is a target promising a comprehensive understanding of brain function. While the astrocytic response to excitatory synaptic activity has been…

Cell Behavior · Quantitative Biology 2019-03-19 Ioannis E. Polykretis , Vladimir A. Ivanov , Konstantinos P. Michmizos

The mitogen-activated protein kinase (MAPK) signaling cascade, an evolutionarily conserved motif present in all eukaryotic cells, is involved in coordinating critical cell-fate decisions, regulating protein synthesis, and mediating learning…

Subcellular Processes · Quantitative Biology 2024-06-11 Tanmay Mitra , Shakti N. Menon , Sitabhra Sinha

A new stimulation paradigm is presented for the stimulation of nerve cells by extracellular electric currents. In the new paradigm stimulation is achieved with the current spike induced by a voltage step whenever the voltage step is applied…

Other Quantitative Biology · Quantitative Biology 2016-03-08 Erich W. Schmid

Signals consisting of a sequence of pulses show that inherent origin of the 1/f noise is a Brownian fluctuation of the average interevent time between subsequent pulses of the pulse sequence. In this paper we generalize the model of…

Statistical Mechanics · Physics 2009-09-29 Vygintas Gontis , Bronislovas Kaulakys

Recurrent networks of non-linear units display a variety of dynamical regimes depending on the structure of their synaptic connectivity. A particularly remarkable phenomenon is the appearance of strongly fluctuating, chaotic activity in…

Neurons and Cognition · Quantitative Biology 2017-05-10 Francesca Mastrogiuseppe , Srdjan Ostojic

We developed a model of cortical computation that implements key features of cortical circuitry and is capable of describing propagation of neural signals between cortical locations in response to spatially distributed stimuli. The model is…

Neurons and Cognition · Quantitative Biology 2018-10-23 Sergei Gepshtein , Ambarish S. Pawar , Sergey Saveliev , Thomas D. Albright

A population of firing neurons is expected to carry not only mean firing rate but also its fluctuation and synchrony among neurons. In order to examine this possibility, we have studied responses of neuronal ensembles to three kinds of…

Disordered Systems and Neural Networks · Physics 2008-02-18 Hiode Hasegawa
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