Related papers: Suffixient Sets
An \emph{indeterminate string} $x = x[1..n]$ on an alphabet $\Sigma$ is a sequence of nonempty subsets of $\Sigma$; $x$ is said to be \emph{regular} if every subset is of size one. A proper substring $u$ of regular $x$ is said to be a…
For a text given in advance, the substring minimal suffix queries ask to determine the lexicographically minimal non-empty suffix of a substring specified by the location of its occurrence in the text. We develop a data structure answering…
Let $G$ be a graph that admits a perfect matching. A {\sf forcing set} for a perfect matching $M$ of $G$ is a subset $S$ of $M$, such that $S$ is contained in no other perfect matching of $G$. This notion originally arose in chemistry in…
A subset $S$ of vertices in a graph $G$ is a secure total dominating set of $G$ if $S$ is a total dominating set of $G$ and, for each vertex $u \not\in S$, there is a vertex $v \in S$ such that $uv$ is an edge and $(S \setminus \{v\}) \cup…
The suffix trees are fundamental data structures for various kinds of string processing. The suffix tree of a text string $T$ of length $n$ has $O(n)$ nodes and edges, and the string label of each edge is encoded by a pair of positions in…
Given a one-dimensional shift $X$, let $|F_X(\ell)|$ be the number of follower sets of words of length $\ell$ in $X$. We call the sequence $\{|F_X(\ell)|\}_{\ell \in \mathbb{N}}$ the follower set sequence of the shift $X$. Extender sets are…
A graph is called set-sequential if its vertices can be labeled with distinct nonzero vectors in $\mathbb{F}_2^n$ such that when each edge is labeled with the sum$\pmod{2}$ of its vertices, every nonzero vector in $\mathbb{F}_2^n$ is the…
Let G be a graph with a perfect matching. A complete forcing set of G is a subset of edges of G to which the restriction of every perfect matching is a forcing set of it. The complete forcing number of G is the minimum cardinality of…
Given two strings $T$ and $S$ and a set of strings $P$, for each string $p \in P$, consider the unique substrings of $T$ that have $p$ as their prefix and $S$ as their suffix. Two problems then come to mind; the first problem being the…
In this paper, we introduce saturation and semisaturation functions of sequences, and we prove a number of fundamental results about these functions. Given a forbidden sequence $u$ with $r$ distinct letters, we say that a sequence $s$ on a…
Phylogenetically decisive collections of taxon sets have the property that if trees are chosen for each of their elements, as long as these trees are compatible, the resulting supertree is unique. This means that as long as the trees…
We show that the compressed suffix array and the compressed suffix tree of a string $T$ can be built in $O(n)$ deterministic time using $O(n\log\sigma)$ bits of space, where $n$ is the string length and $\sigma$ is the alphabet size.…
A subset $S\subseteq V$ in a graph $G=(V,E)$ is a total $[1,2]$-set if, for every vertex $v\in V$, $1\leq |N(v)\cap S|\leq 2$. The minimum cardinality of a total $[1,2]$-set of $G$ is called the total $[1,2]$-domination number, denoted by…
There have been multiple attempts to resolve various inflection matching problems in information retrieval. Stemming is a common approach to this end. Among many techniques for stemming, statistical stemming has been shown to be effective…
A choice dictionary is a data structure that can be initialized with a parameter $n\in\{1,2,\ldots\}$ and subsequently maintains an initially empty subset $S$ of $\{1,\ldots,n\}$ under insertion, deletion, membership queries and an…
We explore a reconfiguration version of the dominating set problem, where a dominating set in a graph $G$ is a set $S$ of vertices such that each vertex is either in $S$ or has a neighbour in $S$. In a reconfiguration problem, the goal is…
A graph automorphism is a bijective mapping of the vertices that preserves adjacent vertices. A vertex determining set of a graph is a set of vertices such that the only automorphism that fixes those vertices is the identity. The size of a…
We describe a compression-aware method to compute all-vs-all maximal exact matches (MEM) among strings of a repetitive collection $\mathcal{T}$. The key concept in our work is the construction of a fully-balanced grammar $\mathcal{G}$ from…
Extremal problems related to the enumeration of graph substructures, such as independent sets, matchings, and induced matchings, have become a prominent area of research with the advancement of graph theory. A subset of vertices is called a…
Let $G=(V,E)$ be an undirected graph without loops and multiple edges. A subset $C\subseteq V$ is called \emph{identifying} if for every vertex $x\in V$ the intersection of $C$ and the closed neighbourhood of $x$ is nonempty, and these…