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Related papers: Community recommendations on cryoEM data archiving…

200 papers

Urban Building Energy Models (UBEM) are vital for enhancing energy efficiency and sustainability in urban planning. However, data scarcity often challenges their validation, particularly the lack of hourly measured data and the variety of…

Applications · Statistics 2025-04-30 Chunxiao Wang , Bruno Duplessis , Eric Peirano , Pascal Schetelat , Peter Riederer

This volume contains the proceedings of PrePost 2017 (the Second International Workshop on Pre- and Post-Deployment Verification Techniques), taking place on 19th September 2017 in Torino, Italy, as a satellite event of the 13th…

Logic in Computer Science · Computer Science 2017-08-24 Adrian Francalanza , Gordon J. Pace

This volume contains the proceedings of HCVS 2016, the Third Workshop on Horn Clauses for Verification and Synthesis which was held on April 3, 2016 in Eindhoven, The Netherlands as a satellite event of the European Joint Conferences on…

Logic in Computer Science · Computer Science 2016-07-15 John P. Gallagher , Philipp Rümmer

The CEDAR collaboration is extending and combining the JetWeb and HepData systems to provide a single service for tuning and validating models of high-energy physics processes. The centrepiece of this activity is the fitting by JetWeb of…

High Energy Physics - Phenomenology · Physics 2007-05-23 A. Buckley , J. M. Butterworth , J. Monk , E. Nurse , W. J. Stirling , B. Waugh , M. R. Whalley

A workshop on The Next Generation Gamma-Ray Sources sponsored by the Office of Nuclear Physics at the Department of Energy, was held November 17--19, 2016 in Bethesda, Maryland. The goals of the workshop were to identify basic and applied…

Cellular Electron Cryotomography (CryoET) offers the ability to look inside cells and observe macromolecules frozen in action. A primary challenge for this technique is identifying and extracting the molecular components within the crowded…

Quantitative Methods · Quantitative Biology 2021-08-04 Muyuan Chen , Wei Dai , Ying Sun , Darius Jonasch , Cynthia Y He , Michael F. Schmid , Wah Chiu , Steven J Ludtke

Cryo-electron microscopy (cryo-EM) is a powerful technique for determining the structure of proteins and other macromolecular complexes at near-atomic resolution. In single particle cryo-EM, the central problem is to reconstruct the…

Quantitative Methods · Quantitative Biology 2020-02-18 Ellen D. Zhong , Tristan Bepler , Joseph H. Davis , Bonnie Berger

This article introduces tools to analyze set-valued data statistically. The tools were initially developed to analyze results from an interlaboratory comparison made by the Electromagnetic Compatibility Working Group of Eurolab France,…

Methodology · Statistics 2026-01-27 Sébastien Petit , Sébastien Marmin , Nicolas Fischer

Cryopreservation is beset with the challenge of protocol alignment across a wide range of cell types and process variables. By taking a cross-sectional assessment of previously published cryopreservation data (sample means and standard…

Quantitative Methods · Quantitative Biology 2014-04-08 S Sambu

Thanks to automated cryo-EM and GPU-accelerated processing, single-particle cryo-EM has become a rapid structure determination method that permits capture of dynamical structures of molecules in solution, which has been recently…

Quantitative Methods · Quantitative Biology 2025-09-30 Szu-Chi Chung , Cheng-Yu Hung , Huei-Lun Siao , Hung-Yi Wu , Wei-Hau Chang , I-Ping Tu

Analysis cyberinfrastructure refers to the combination of software and computer hardware used to support late-stage data analysis in High Energy Physics (HEP). For the purposes of this white paper, late-stage data analysis refers…

Data Analysis, Statistics and Probability · Physics 2022-03-18 Kevin Lannon , Paul Brenner , Mike Hildreth , Kenyi Hurtado Anampa , Alan Malta Rodrigues , Kelci Mohrman , Doug Thain , Benjamin Tovar

Single particle electron cryomicroscopy (cryo-EM) allows for structures of proteins and protein complexes to be determined from images of non-crystalline specimens. Cryo-EM data analysis requires electron microscope images of randomly…

Instrumentation and Detectors · Physics 2015-11-23 Jianhua Zhao , Marcus A. Brubaker , Samir Benlekbir , John L. Rubinstein

Imaging of liquids and cryogenic biological materials by electron microscopy has been recently enabled by innovative approaches for specimen preparation and the fast development of optimised instruments for cryo-enabled electron microscopy…

This report serves two purposes: To introduce and validate the Execution-Cache-Memory (ECM) performance model and to provide a thorough analysis of current Intel processor architectures with a special emphasis on Intel Xeon Haswell-EP. The…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-06 Johannes Hofmann , Jan Eitzinger , Dietmar Fey

An increasing number of entities are described by interlinked data rather than documents on the Web. Entity Resolution (ER) aims to identify descriptions of the same real-world entity within one or across knowledge bases in the Web of data.…

Databases · Computer Science 2020-05-20 Vasilis Efthymiou , Kostas Stefanidis , Vassilis Christophides

Cryo-electron microscopy (Cryo-EM) enables high-resolution imaging of biomolecules, but structural heterogeneity remains a major challenge in 3D reconstruction. Traditional methods assume a discrete set of conformations, limiting their…

Machine Learning · Statistics 2025-09-09 Diego Sanchez Espinosa , Erik H Thiede , Yunan Yang

Entity Matching (EM) refers to the problem of determining whether two different data representations refer to the same real-world entity. It has been a long-standing interest of the data management community and many efforts have been paid…

Databases · Computer Science 2021-06-17 Jin Wang , Yuliang Li , Wataru Hirota

A neutrino community workshop was held at Fermilab in Jan 2020, with the aim of developing an implementation plan for a set of common interfaces to Neutrino Event Generators. This white paper summarizes discussions at the workshop and the…

Since the internal temperature is less accessible than surface temperature, there is an urgent need to develop accurate and real-time estimation algorithms for better thermal management and safety. This work presents a novel framework for…

Systems and Control · Electrical Eng. & Systems 2025-09-15 Yusheng Zheng , Wenxue Liu , Yunhong Che , Ferdinand Grimm , Jingyuan Zhao , Xiaosong Hu , Simona Onori , Remus Teodorescu , Gregory J. Offer

Objective: This study addresses conceptual issues around data standardisation in audiology, and outlines steps toward achieving it. It reports a survey of the computational audiology community on their current understanding, needs, and…