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Molecular biology data are subject to terms of use that vary widely between databases and curating institutions. This research presents a taxonomy of contractual and technical restrictions applicable to databases in life science. It builds…

Quantitative Methods · Quantitative Biology 2012-02-20 Melanie Dulong De Rosnay

Data Science is a multidisciplinary field that plays a crucial role in extracting valuable insights and knowledge from large and intricate datasets. Within the realm of Data Science, two fundamental components are Information Theory (IT)…

Data Analysis, Statistics and Probability · Physics 2024-12-31 Shahid Nawaz , Muhammad Saleem , F. V. Kusmartsev , Dalaver H. Anjum

Without sufficient information about research data practices occurring in a particular research organisation, there is a risk of mismatching research data service efforts with the needs of its researchers. This study describes how data…

Digital Libraries · Computer Science 2022-05-12 Antti Mikael Rousi

Context: Successfully addressing stakeholder concerns that are related to software system development and operation is crucial to achieving development goals. The importance of using a systematic approach to addressing these concerns…

Software Engineering · Computer Science 2023-02-14 Sandun Dasanayake , Jouni Markkula , Markku Oivo

Machine Science, or Data-driven Research, is a new and interesting scientific methodology that uses advanced computational techniques to identify, retrieve, classify and analyse data in order to generate hypotheses and develop models. In…

Information Retrieval · Computer Science 2010-08-24 T W Kelsey , W H B Wallace

Increasingly, artificial intelligence (AI) and machine learning (ML) are used in eScience applications [9]. While these approaches have great potential, the literature has shown that ML-based approaches frequently suffer from results that…

Machine Learning · Computer Science 2024-07-03 Zhiwei Li , Carl Kesselman , Mike D'Arch , Michael Pazzani , Benjamin Yizing Xu

Computer simulations have become a very powerful tool for scientific research. Given the vast complexity that comes with many open scientific questions, a purely analytical or experimental approach is often not viable. For example,…

Neural and Evolutionary Computing · Computer Science 2016-07-12 Roman Bauer , Lukas Breitwieser , Alberto Di Meglio , Leonard Johard , Marcus Kaiser , Marco Manca , Manuel Mazzara , Max Talanov

The exponential growth of neuroscientific data necessitates platforms that facilitate data management and multidisciplinary collaboration. In this paper, we introduce Pennsieve - an open-source, cloud-based scientific data management…

Computers and Society · Computer Science 2024-09-24 Zack Goldblum , Zhongchuan Xu , Haoer Shi , Patryk Orzechowski , Jamaal Spence , Kathryn A Davis , Brian Litt , Nishant Sinha , Joost Wagenaar

A traditional database systems is organized around a single data model that determines how data can be organized, stored and manipulated. But the vision of this paper is to develop new principles and techniques to manage multiple data…

Databases · Computer Science 2016-12-26 Jiaheng Lu , Zhen Hua Liu , Pengfei Xu , Chao Zhang

The proliferation of sensor technologies and advancements in data collection methods have enabled the accumulation of very large amounts of data. Increasingly, these datasets are considered for scientific research. However, the design of…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-28 Fatemeh Rouzbeh , Ananth Grama , Paul Griffin , Mohammad Adibuzzaman

In the current world due to the huge demand for storage, DNA-based storage solution sounds quite promising because of their longevity, low power consumption, and high capacity. However in real life storing data in the form of DNA is quite…

Information Theory · Computer Science 2024-04-09 Sanket Doshi , Mihir Gohel , Manish K. Gupta

Managing data and code in open scientific research is complicated by two key problems: large datasets often cannot be stored alongside code in repository platforms like GitHub, and iterative analysis can lead to unnoticed changes to data,…

Digital Libraries · Computer Science 2023-11-10 Vince Buffalo

We introduce a use case and propose a system for data and knowledge integration in life sciences. In particular, we focus on linking clinical resources (electronic patient records) with scientific documents and data (research articles,…

Computers and Society · Computer Science 2013-04-25 Vit Novacek , Aisha Naseer

The emergence of "big data" offers unprecedented opportunities for not only accelerating scientific advances but also enabling new modes of discovery. Scientific progress in many disciplines is increasingly enabled by our ability to examine…

Computers and Society · Computer Science 2017-07-03 Vasant G. Honavar , Mark D. Hill , Katherine Yelick

The work presents a solution for completely decentralized data management systems in geographically distributed environments with administratively unrelated or loosely related user groups and in conditions of partial or complete lack of…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-12-21 Andrey Demichev , Alexander Kryukov

The twenty-first century has ushered in the age of big data and data economy, in which data DNA, which carries important knowledge, insights and potential, has become an intrinsic constituent of all data-based organisms. An appropriate…

Computers and Society · Computer Science 2020-07-08 Longbing Cao

Nowadays, science has been coming into a new paradigm, called data-intensive science. While current studies of the new phenomenon focused on building up infrastructure for this new paradigm, yet a few studies concern users of scientific…

Instrumentation and Methods for Astrophysics · Physics 2011-02-08 Jian Zhang , Chaomei Chen , Michael S. Vogeley

Social science concerns issues on individuals, relationships, and the whole society. The complexity of research topics in social science makes it the amalgamation of multiple disciplines, such as economics, political science, and sociology,…

Social and Information Networks · Computer Science 2020-08-31 Jun Zhang , Wei Wang , Feng Xia , Yu-Ru Lin , Hanghang Tong

We propose the new cloud-based service OpenResearch for managing and analyzing data about scientific events such as conferences and workshops in a persistent and reliable way. This includes data about scientific articles, participants,…

Digital Libraries · Computer Science 2017-11-29 Andreas Behrend , Sahar Vahdati , Christoph Lange , Christiane Engels

Background: Clinical decision support systems (CDSS) are a category of health information technologies that can assist clinicians to choose optimal treatments. These support systems are based on clinical trials and expert knowledge;…