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Scientific applications produce vast amounts of data, posing grand challenges in the underlying data management and analytic tasks. Progressive compression is a promising way to address this problem, as it allows for on-demand data…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-02 Yanliang Li , Wenbo Li , Qian Gong , Qing Liu , Norbert Podhorszki , Scott Klasky , Xin Liang , Jieyang Chen

Accurate land cover segmentation of spectral images is challenging and has drawn widespread attention in remote sensing due to its inherent complexity. Although significant efforts have been made for developing a variety of methods, most of…

Image and Video Processing · Electrical Eng. & Systems 2021-11-30 Carlos Hinojosa , Esteban Vera , Henry Arguello

Curating, processing, and combining large-scale medical imaging datasets from national studies is a non-trivial task due to the intense computation and data throughput required, variability of acquired data, and associated financial…

Dual-energy computed tomography (DECT) is an advanced CT scanning technique enabling material characterization not possible with conventional CT scans. It allows the reconstruction of energy decay curves at each 3D image voxel, representing…

Image and Video Processing · Electrical Eng. & Systems 2022-02-01 Segolene Brivet , Faicel Chamroukhi , Mark Coates , Reza Forghani , Peter Savadjiev

Attention-based deep networks have been successfully applied on textual data in the field of NLP. However, their application on protein sequences poses additional challenges due to the weak semantics of the protein words, unlike the plain…

Machine Learning · Computer Science 2022-08-29 Ashish Ranjan , Md Shah Fahad , Akshay Deepak

FPGA-based data processing in datacenters is increasing in popularity due to the demands of modern workloads and the ensuing necessity for specialization in hardware. Driven by this trend, vendors are rapidly adapting reconfigurable devices…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-06 Kaan Kara , Christoph Hagleitner , Dionysios Diamantopoulos , Dimitris Syrivelis , Gustavo Alonso

We present a novel and interpretable framework for electrocardiogram (ECG)-based disease detection that combines hyperdimensional computing (HDC) with learnable neural encoding. Unlike conventional HDC approaches that rely on static, random…

Signal Processing · Electrical Eng. & Systems 2025-07-24 ZhengXiao He , Jinghao Wen , Huayu Li , Siyuan Tian , Ao Li

Intelligent spectrum management is crucial for improving spectrum efficiency and achieving secure utilization of spectrum resources. However, existing intelligent spectrum management methods, typically based on small-scale models, suffer…

Signal Processing · Electrical Eng. & Systems 2025-12-16 Fuhui Zhou , Chunyu Liu , Hao Zhang , Wei Wu , Qihui Wu , Tony Q. S. Quek , Chan-Byoung Chae

In the last few years, large improvements in image clustering have been driven by the recent advances in deep learning. However, due to the architectural complexity of deep neural networks, there is no mathematical theory that explains the…

Computer Vision and Pattern Recognition · Computer Science 2021-08-30 Angel Villar-Corrales , Veniamin I. Morgenshtern

HyperDimensional Computing (HDC) as a machine learning paradigm is highly interesting for applications involving continuous, semi-supervised learning for long-term monitoring. However, its accuracy is not yet on par with other Machine…

Machine Learning · Computer Science 2023-12-19 William Andrew Simon , Una Pale , Tomas Teijeiro , David Atienza

Protein motifs are conserved fragments occurred frequently in protein sequences. They have significant functions, such as active site of an enzyme. Search and clustering protein sequence motifs are computational intensive. Most existing…

Genomics · Quantitative Biology 2017-01-03 Haifeng Chen , Ting Chen

The accurate sampling of protein dynamics is an ongoing challenge despite the utilization of High-Performance Computers (HPC) systems. Utilizing only "brute force" MD simulations requires an unacceptably long time to solution. Adaptive…

Quantitative Methods · Quantitative Biology 2020-09-25 Eugen Hruska , Vivekanandan Balasubramanian , Hyungro Lee , Shantenu Jha , Cecilia Clementi

We propose a deep clustering architecture alongside image segmentation for medical image analysis. The main idea is based on unsupervised learning to cluster images on severity of the disease in the subject's sample, and this image is then…

Image and Video Processing · Electrical Eng. & Systems 2020-05-28 Sharmin Pathan , Anant Tripathi

Epigenetic alterations have an important role in the development of several types of cancer. Epigenetic studies generate a large amount of data, which makes it essential to develop novel models capable of dealing with large-scale data. In…

Machine Learning · Computer Science 2021-02-22 del Amor Rocío , Colomer Adrián , Monteagudo Carlos , Naranjo Valery

Real-time remote sensing applications like search and rescue missions, military target detection, environmental monitoring, hazard prevention and other time-critical applications require onboard real time processing capabilities or…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-25 Mahmoud Hossam

Two-dimensional mass spectrometry (2D MS) is a method for tandem mass spectrometry that enables the correlation between precursor and fragment ions without the need for ion isolation. On a Fourier transform ion cyclotron resonance mass…

Spectral dimensionality reduction methods enable linear separations of complex data with high-dimensional features in a reduced space. However, these methods do not always give the desired results due to irregularities or uncertainties of…

Machine Learning · Statistics 2018-05-21 Momo Matsuda , Keiichi Morikuni , Tetsuya Sakurai

Spectral imaging enables spatially-resolved identification of materials in remote sensing, biomedicine, and astronomy. However, acquisition times require balancing spectral and spatial resolution with signal-to-noise. Hyperspectral imaging…

Computer Vision and Pattern Recognition · Computer Science 2020-03-17 Nguyen Tran , Rupali Mankar , David Mayerich , Zhu Han

Deep learning is an advanced technology that relies on large-scale data and complex models for feature extraction and pattern recognition. It has been widely applied across various fields, including computer vision, natural language…

Genomics · Quantitative Biology 2024-12-24 Yindan Luo , Jiaxin Cai

Significant progress has been made recently in point cloud segmentation utilizing an encoder-decoder framework, which initially encodes point clouds into low-resolution representations and subsequently decodes high-resolution predictions.…

Computer Vision and Pattern Recognition · Computer Science 2023-10-13 Haibo Qiu , Baosheng Yu , Yixin Chen , Dacheng Tao