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Related papers: MetaStore: High-Performance Metagenomic Analysis v…

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Edge devices operating in dynamic environments critically need the ability to continually learn without catastrophic forgetting. The strict resource constraints in these devices pose a major challenge to achieve this, as continual learning…

Systems and Control · Electrical Eng. & Systems 2024-11-12 Fatima Tuz Zohora , Vedant Karia , Nicholas Soures , Dhireesha Kudithipudi

The rapid advancement of embedded multicore and many-core systems has revolutionized computing, enabling the development of high-performance, energy-efficient solutions for a wide range of applications. As models scale up in size, data…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-15 Ruhai Lin , Rui-Jie Zhu , Jason K. Eshraghian

The marine environment is one of the most important sources for microbial biodiversity on the planet. These microbes are drivers for many biogeochemical processes, and their enormous genetic potential is still not fully explored or…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-15 Espen Mikal Robertsen , Tim Kahlke , Inge Alexander Raknes , Edvard Pedersen , Erik Kjærner Semb , Martin Ernstsen , Lars Ailo Bongo , Nils Peder Willassen

Metamaterials are artificial materials designed to exhibit effective material parameters that go beyond those found in nature. Composed of unit cells with rich designability that are assembled into multiscale systems, they hold great…

Computational Engineering, Finance, and Science · Computer Science 2023-12-07 Doksoo Lee , Wei Wayne Chen , Liwei Wang , Yu-Chin Chan , Wei Chen

Owing to the complexity and variability of metagenomic studies, modern machine learning approaches have seen increased usage to answer a variety of question encompassing the full range of metagenomic NGS data analysis. We review here the…

Genomics · Quantitative Biology 2016-03-09 Hayssam Soueidan , Macha Nikolski

Metaheuristics are known to be strong in solving large-scale instances of computationally hard problems. However, their efficiency still needs exploration in the context of instance structure, scale and numerical properties for many of…

Computational Engineering, Finance, and Science · Computer Science 2018-01-11 David Chalupa , Peter Nielsen

Optimization of functionally graded metamaterial arrays with a high dimensional and continuous geometric design space is cumbersome and could be accelerated via machine learning tools. Mechanical metamaterials can manipulate acoustic or…

A wide variety of large-scale data has been produced in bioinformatics. In response, the need for efficient handling of biomedical big data has been partly met by parallel computing. However, the time demand of many bioinformatics programs…

Genomics · Quantitative Biology 2015-08-11 Sungmin Lee , Hyeyoung Min , Sungroh Yoon

Big data applications have fast arriving data that must be quickly ingested. At the same time, they have specific needs to preprocess and transform the data before it could be put to use. The current practice is to do these preparatory…

Databases · Computer Science 2017-01-24 Alekh Jindal , Jorge-Arnulfo Quiane-Ruiz , Samuel Madden

An important topic in medical research is the process of improving the images obtained from medical devices. As a consequence, there is also a need to improve medical image resolution and analysis. Another issue in this field is the large…

Image and Video Processing · Electrical Eng. & Systems 2023-05-26 Elena-Simona Apostol , Ciprian-Octavian Truică

Deep learning (DL) has achieved remarkable progress in the field of medical imaging. However, adapting DL models to medical tasks remains a significant challenge, primarily due to two key factors: (1) architecture selection, as different…

Computer Vision and Pattern Recognition · Computer Science 2025-04-24 Lotfi Abdelkrim Mecharbat , Ibrahim Almakky , Martin Takac , Mohammad Yaqub

Computational storage drives (CSD) are solid-state drives (SSD) empowered by general-purpose processors that can perform in-storage processing. They have the potential to improve both performance and energy significantly for big-data…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-12-24 Ali HeydariGorji , Mahdi Torabzadehkashi , Siavash Rezaei , Hossein Bobarshad , Vladimir Alves , Pai H. Chou

Inspired by the recent achievements of machine learning in diverse domains, data-driven metamaterials design has emerged as a compelling paradigm that can unlock the potential of multiscale architectures. The model-centric research trend,…

Computational Engineering, Finance, and Science · Computer Science 2024-03-06 Doksoo Lee , Yu-Chin Chan , Wei Wayne Chen , Liwei Wang , Anton van Beek , Wei Chen

We present VStore, a data store for supporting fast, resource-efficient analytics over large archival videos. VStore manages video ingestion, storage, retrieval, and consumption. It controls video formats along the video data path. It is…

Databases · Computer Science 2019-02-19 Tiantu Xu , Luis Materon Botelho , Felix Xiaozhu Lin

Partitioning large machine learning models across distributed accelerator systems is a complex process, requiring a series of interdependent decisions that are further complicated by internal sharding ambiguities. Consequently, existing…

In the last decades, the computational power of GPUs has grown exponentially, allowing current deep learning (DL) applications to handle increasingly large amounts of data at a progressively higher throughput. However, network and storage…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-08 Francesco Versaci , Giovanni Busonera

Metamaterials, engineered materials with architected structures across multiple length scales, offer unprecedented and tunable mechanical properties that surpass those of conventional materials. However, leveraging advanced machine learning…

Deep Neural Networks (DNNs) face challenges during deployment due to covariate shift, i.e., data distribution shifts between development and deployment contexts. Fine-tuning adapts pre-trained models to new contexts requiring smaller…

Machine Learning · Computer Science 2025-09-19 Amin Abbasishahkoo , Mahboubeh Dadkhah , Lionel Briand , Dayi Lin

Incorporation of machine learning (ML) techniques into atomic-scale modeling has proven to be an extremely effective strategy to improve the accuracy and reduce the computational cost of simulations. It also entails conceptual and practical…

Metamaterials are engineered materials composed of specially designed unit cells that exhibit extraordinary properties beyond those of natural materials. Complex engineering tasks often require heterogeneous unit cells to accommodate…

Machine Learning · Computer Science 2025-11-06 Hongrui Chen , Liwei Wang , Levent Burak Kara