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The ability to design molecules while preserving similarity to a target molecule and/or property is crucial for various applications in drug discovery, chemical design, and biology. We introduce in this paper an efficient training-free…

Machine Learning · Computer Science 2025-11-18 Jiri Navratil , Jarret Ross , Payel Das , Youssef Mroueh , Samuel C Hoffman , Vijil Chenthamarakshan , Brian Belgodere

We study how to generate molecule conformations (i.e., 3D structures) from a molecular graph. Traditional methods, such as molecular dynamics, sample conformations via computationally expensive simulations. Recently, machine learning…

Machine Learning · Computer Science 2021-04-01 Minkai Xu , Shitong Luo , Yoshua Bengio , Jian Peng , Jian Tang

Iterative optimization is central to modern artificial intelligence (AI) and provides a crucial framework for understanding adaptive systems. This review provides a unified perspective on this subject, bridging classic theory with neural…

Machine Learning · Computer Science 2025-10-22 Jesús García Fernández , Nasir Ahmad , Marcel van Gerven

Recent literature on fine-tuning Large Language Models highlights a fundamental debate. While Full Fine-Tuning (FFT) provides the representational plasticity required for high-entropy knowledge injection, Low-Rank Adaptation (LoRA) can…

Computation and Language · Computer Science 2026-05-19 Haozhan Tang , Xiuqi Zhu , Xinyin Zhang , Boxun Li , Virginia Smith , Kevin Kuo

Solving the optimal power flow (OPF) problem is a fundamental task to ensure the system efficiency and reliability in real-time electricity grid operations. We develop a new topology-informed graph neural network (GNN) approach for…

Systems and Control · Electrical Eng. & Systems 2022-11-03 Shaohui Liu , Chengyang Wu , Hao Zhu

Locally supervised learning aims to train a neural network based on a local estimation of the global loss function at each decoupled module of the network. Auxiliary networks are typically appended to the modules to approximate the gradient…

Machine Learning · Computer Science 2022-08-02 Hasnain Irshad Bhatti , Jaekyun Moon

Distributionally robust offline reinforcement learning (RL), which seeks robust policy training against environment perturbation by modeling dynamics uncertainty, calls for function approximations when facing large state-action spaces.…

Machine Learning · Computer Science 2025-11-03 Zhishuai Liu , Pan Xu

We introduce a Noise-based prior Learning (NoL) approach for training neural networks that are intrinsically robust to adversarial attacks. We find that the implicit generative modeling of random noise with the same loss function used…

Machine Learning · Computer Science 2019-06-04 Priyadarshini Panda , Kaushik Roy

Synchronous federated learning scales poorly due to the straggler effect. Asynchronous algorithms increase the update throughput by processing updates upon arrival, but they introduce two fundamental challenges: gradient staleness, which…

Machine Learning · Computer Science 2026-03-30 Abdelkrim Alahyane , Céline Comte , Matthieu Jonckheere

Generating novel graph structures that optimize given objectives while obeying some given underlying rules is fundamental for chemistry, biology and social science research. This is especially important in the task of molecular graph…

Machine Learning · Computer Science 2019-02-26 Jiaxuan You , Bowen Liu , Rex Ying , Vijay Pande , Jure Leskovec

Artificial intelligence and deep learning are currently reshaping numerical simulation frameworks by introducing new modeling capabilities. These frameworks are extensively investigated in the context of model correction and…

Machine Learning · Computer Science 2023-11-20 Said Ouala , Bertrand Chapron , Fabrice Collard , Lucile Gaultier , Ronan Fablet

Random weight change (RWC) algorithm is extremely component and robust for the hardware implementation of neural networks. RWC and Genetic algorithm (GA) are well known methodologies used for optimizing and learning the neural network (NN).…

Neural and Evolutionary Computing · Computer Science 2019-07-18 Mohammad Ibrahim Sarker , Zubaer Ibna Mannan , Hyongsuk Kim

It has been intensively investigated that the local shape, especially flatness, of the loss landscape near a minimum plays an important role for generalization of deep models. We developed a training algorithm called PoF: Post-Training of…

Machine Learning · Computer Science 2022-07-06 Ikuro Sato , Ryota Yamada , Masayuki Tanaka , Nakamasa Inoue , Rei Kawakami

Offline optimization is an emerging problem in many experimental engineering domains including protein, drug or aircraft design, where online experimentation to collect evaluation data is too expensive or dangerous. To avoid that, one has…

Machine Learning · Computer Science 2024-05-10 Yassine Chemingui , Aryan Deshwal , Trong Nghia Hoang , Janardhan Rao Doppa

Recent analyses of certain gradient descent optimization methods have shown that performance can degrade in some settings - such as with stochasticity or implicit momentum. In deep reinforcement learning (Deep RL), such optimization methods…

Machine Learning · Computer Science 2018-10-08 Peter Henderson , Joshua Romoff , Joelle Pineau

Molecular dynamics (MD) simulation is essential for various scientific domains but computationally expensive. Learning-based force fields have made significant progress in accelerating ab-initio MD simulation but are not fast enough for…

Machine Learning · Computer Science 2023-08-29 Xiang Fu , Tian Xie , Nathan J. Rebello , Bradley D. Olsen , Tommi Jaakkola

Graph Neural Networks (GNNs) succeed significantly in many applications recently. However, balancing GNNs training runtime cost, memory consumption, and attainable accuracy for various applications is non-trivial. Previous training…

Machine Learning · Computer Science 2024-04-16 Tong Qiao , Jianlei Yang , Yingjie Qi , Ao Zhou , Chen Bai , Bei Yu , Weisheng Zhao , Chunming Hu

Optimal power flow (OPF) is a critical optimization problem that allocates power to the generators in order to satisfy the demand at a minimum cost. Solving this problem exactly is computationally infeasible in the general case. In this…

Systems and Control · Electrical Eng. & Systems 2022-10-18 Damian Owerko , Fernando Gama , Alejandro Ribeiro

As we know, some global optimization problems cannot be solved using analytic methods, so numeric/algorithmic approaches are used to find near to the optimal solutions for them. A stochastic global optimization algorithm (SGoal) is an…

Artificial Intelligence · Computer Science 2017-06-08 Jonatan Gomez

The Efficient Global Optimization (EGO) algorithm uses a conditional Gaus-sian Process (GP) to approximate an objective function known at a finite number of observation points and sequentially adds new points which maximize the Expected…

Optimization and Control · Mathematics 2016-03-09 Hossein Mohammadi , Rodolphe Le Riche , Eric Touboul
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