Related papers: Counting Bubbles in Linear Chord Diagrams
In a linear chord diagram a short chord joins adjacent vertices while a bubble is a region devoid of short chords. We define a bridge to be a chord joining a vertex interior to a bubble to one exterior to it. Building on earlier work, we…
Linear chord diagrams are partitions of $\left[2n\right]$ into $n$ blocks of size two called chords. We refer to a block of the form $\{i,i+1\}$ as a short chord. In this paper, we study the distribution of the number of short chords on the…
A linear chord diagram of size $n$ is a partition of the set $\{1,2,\cdots,2n\}$ into sets of size two, called chords. From a table showing the number of linear chord diagrams of degree $n$ such that every chord has length at least $k$, we…
We generalize the notion of linear chord diagrams to the case of matched sets of size $k$, which we call $k$-chord diagrams. We provide formal generating functions and recurrence relations enumerating these $k$-chord diagrams by the number…
A graph is chordal if it does not contain an induced cycle of length greater than three. We determine the minimum size of a chordal graph with given order and minimum degree. In doing so, we have discovered interesting properties of chordal…
A chord diagram consists of a circle, called the backbone, with line segments, called chords, whose endpoints are attached to distinct points on the circle. The genus of a chord diagram is the genus of the orientable surface obtained by…
A chord diagram refers to a set of chords with distinct endpoints on a circle. The intersection graph of a chord diagram $\cal C$ is defined by substituting the chords of $\cal C$ with vertices and by adding edges between two vertices…
We consider embeddings of maximal outerplanar graphs whose vertices all lie on a cycle $\mathcal{C}$ bounding a face. Each edge of the graph that is not in $\mathcal{C}$, a chord, is assigned a length equal to the length of the shortest…
We analyze the statistical properties of bubble models for the large-scale distribution of galaxies. To this aim, we realize static simulations, in which galaxies are mostly randomly arranged in the regions surrounding bubbles. As a first…
In this paper we discuss the number of regions in a unit circle after drawing $n$ i.i.d. random chords in the circle according to a particular family of distribution. We find that as $n$ goes to infinity, the distribution of the number of…
Chordal clutters in the sense of [14] and [3] are defined via simplicial orders. Their circuit ideal has a linear resolution, independent of the characteristic of the base field. We show that any Betti sequence of an ideal with linear…
Chordal graphs are the graphs in which every cycle of length at least four has a chord. A set $S$ is a vertex separator for vertices $a$ and $b$ if the removal of $S$ of the graph separates $a$ and $b$ into distinct connected components. A…
Consider a configuration of pebbles distributed on the vertices of a connected graph of order $n$. A pebbling step consists of removing two pebbles from a given vertex and placing one pebble on an adjacent vertex. A distribution of pebbles…
A chord diagram is a set of chords in which no pair of chords has a common endvertex. For a chord diagram $E$ having a crossing $S = \{ ac, bd \}$, by the chord expansion of $E$ with respect to $S$, we have two chord diagrams $E_1 =…
We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…
A bipartite graph is chordal bipartite if every cycle of length at least six contains a chord. We determine the minimum size in 2-connected chordal bipartite graphs with given order.
We study the number of chords and the number of crossings in the largest component of a random chord diagram when the chords are sparsely crossing. This is equivalent to studying the number of vertices and the number of edges in the largest…
A configuration of pebbles on the vertices of a graph is solvable if one can place a pebble on any given root vertex via a sequence of pebbling steps. A function is a pebbling threshold for a sequence of graphs if a randomly chosen…
Superbubbles are acyclic induced subgraphs of a digraph with single entrance and exit that naturally arise in the context of genome assembly and the analysis of genome alignments in computational biology. These structures can be computed in…
We study the asymptotic distributions of the number of crossings and the number of simple chords in a random chord diagram. Using size-bias coupling and Stein's method, we obtain bounds on the Kolmogorov distance between the distribution of…