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Magnetic resonance imaging (MRI) is a cornerstone of clinical neuroimaging, yet conventional MRIs provide qualitative information heavily dependent on scanner hardware and acquisition settings. While quantitative MRI (qMRI) offers intrinsic…

We propose a magnetic resonance (MR)-based method for estimation of continuous linear attenuation coefficients (LAC) in positron emission tomography (PET) using a physical compartmental model and ultrashort echo time (UTE)/multi-echo Dixon…

Conventional computed tomography (CT) lacks the ability to capture dynamic, weight-bearing joint motion. Functional evaluation, particularly after surgical intervention, requires four-dimensional (4D) imaging, but current methods are…

Computer Vision and Pattern Recognition · Computer Science 2025-08-25 Hao Tang , Rongxi Yi , Lei Li , Kaiyi Cao , Jiapeng Zhao , Yihan Xiao , Minghai Shi , Peng Yuan , Yan Xi , Hui Tang , Wei Li , Zhan Wu , Yixin Zhou

Recent advances in Spatial Transcriptomics (ST) pair histology images with spatially resolved gene expression profiles, enabling predictions of gene expression across different tissue locations based on image patches. This opens up new…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Aniruddha Ganguly , Debolina Chatterjee , Wentao Huang , Jie Zhang , Alisa Yurovsky , Travis Steele Johnson , Chao Chen

The diagnosis, prognosis, and treatment of patients with musculoskeletal (MSK) disorders require radiology imaging (using computed tomography, magnetic resonance imaging(MRI), and ultrasound) and their precise analysis by expert…

Image and Video Processing · Electrical Eng. & Systems 2020-03-03 Ismail Irmakci , Syed Muhammad Anwar , Drew A. Torigian , Ulas Bagci

Purpose: To develop and evaluate a new pulse sequence for highly accelerated distortion-free diffusion MRI (dMRI) by inserting additional echoes without prolonging TR, when generalized slice dithered enhanced resolution (gSlider)…

A model-based reconstruction technique for accelerated T2 mapping with improved accuracy is proposed using undersampled Cartesian spin-echo MRI data. The technique employs an advanced signal model for T2 relaxation that accounts for…

Medical Physics · Physics 2015-03-03 Tilman J. Sumpf , Andreas Petrovic , Martin Uecker , Florian Knoll , Jens Frahm

Multi-modal magnetic resonance imaging (MRI) plays a crucial role in comprehensive disease diagnosis in clinical medicine. However, acquiring certain modalities, such as T2-weighted images (T2WIs), is time-consuming and prone to be with…

Image and Video Processing · Electrical Eng. & Systems 2024-05-22 Qi Wang , Zhijie Wen , Jun Shi , Qian Wang , Dinggang Shen , Shihui Ying

Stroke is a common disabling neurological condition that affects about one-quarter of the adult population over age 25; more than half of patients still have poor outcomes, such as permanent functional dependence or even death, after the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-19 Chia-Ling Tsai , Hui-Yun Su , Shen-Feng Sung , Wei-Yang Lin , Ying-Ying Su , Tzu-Hsien Yang , Man-Lin Mai

Knee osteoarthritis is a degenerative joint disease that induces chronic pain and disability. Bone morphological analysis is a promising tool to understand the mechanical aspect of this disorder. This study proposes a 2D bone morphological…

Image and Video Processing · Electrical Eng. & Systems 2024-03-14 Yun Xin Teoh , Alice Othmani , Siew Li Goh , Juliana Usman , Khin Wee Lai

Contrast-enhanced (CE) T1-weighted MRI is central to neuro-oncologic diagnosis but requires gadolinium-based agents, which add cost and scan time, raise environmental concerns, and may pose risks to patients. In this work, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2025-08-19 Bastian Brandstötter , Erich Kobler

We introduce a Mixture of Raytraced Experts, a stacked Mixture of Experts (MoE) architecture which can dynamically select sequences of experts, producing computational graphs of variable width and depth. Existing MoE architectures generally…

Machine Learning · Computer Science 2025-07-17 Andrea Perin , Giacomo Lagomarsini , Claudio Gallicchio , Giuseppe Nuti

Purpose: To systematically investigate the influence of various data consistency layers, (semi-)supervised learning and ensembling strategies, defined in a $\Sigma$-net, for accelerated parallel MR image reconstruction using deep learning.…

Image and Video Processing · Electrical Eng. & Systems 2019-12-20 Kerstin Hammernik , Jo Schlemper , Chen Qin , Jinming Duan , Ronald M. Summers , Daniel Rueckert

Simulation studies, such as finite element (FE) modeling, offer insights into knee joint biomechanics, which may not be achieved through experimental methods without direct involvement of patients. While generic FE models have been used to…

Image and Video Processing · Electrical Eng. & Systems 2024-07-10 Reza Kakavand , Peyman Tahghighi , Reza Ahmadi , W. Brent Edwards , Amin Komeili

In the framework of algebraic inversion, Magnetic Resonance Elastography (MRE) repeatability, reproducibility and robustness were evaluated on extracted shear velocities (or elastic moduli). The same excitation system was implemented at two…

Cross-modal image synthesis is a topical problem in medical image computing. Existing methods for image synthesis are either tailored to a specific application, require large scale training sets, or are based on partitioning images into…

Computer Vision and Pattern Recognition · Computer Science 2017-06-16 Yawen Huang , Ling Shao , Alejandro F. Frangi

We present a microstructure imaging technique for estimating compartment-specific T2 and T2* simultaneously in the human brain. Microstructure imaging with diffusion MRI (dMRI) has enabled the modelling of intra-neurite and extra-neurite…

Medical Physics · Physics 2024-08-21 Ting Gong , Merlin J. Fair , Kawin Setsompop , Hui Zhang

Purpose: To expand the capabilities of Zero Echo Time (ZTE) pulse sequences with a slice selection method suitable for the shortest-lived tissues in the body. Methods: We introduce two new sequences that integrate spin-locking pulses into…

Medical Physics · Physics 2022-01-19 J. Borreguero , F. Galve , J. M. Algarín , J. M. Benlloch , J. Alonso

We propose a novel respiratory motion-resolved MR image reconstruction method that jointly treats multi-echo k-space raw data. Continuously acquired non-Cartesian multi-echo/multi-coil k-space data with free breathing are sorted/binned into…

Image and Video Processing · Electrical Eng. & Systems 2023-04-05 Youngwook Kee , MungSoo Kang , Seongho Jeong , Gerald Behr

Recent advances in Vision Transformers (ViTs) have significantly enhanced medical image segmentation by facilitating the learning of global relationships. However, these methods face a notable challenge in capturing diverse local and global…

Image and Video Processing · Electrical Eng. & Systems 2024-07-11 Szymon Płotka , Maciej Chrabaszcz , Przemyslaw Biecek
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