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Animal habitat surveys play a critical role in preserving the biodiversity of the land. One of the effective ways to gain insights into animal habitats involves identifying animal footprints, which offers valuable information about species…

Computer Vision and Pattern Recognition · Computer Science 2024-06-17 Risa Shinoda , Kaede Shiohara

Recognition of evolutionary units (species, populations) requires integrating several kinds of data such as genetic or phenotypic markers or spatial information, in order to get a comprehensive view concerning the differentiation of the…

Populations and Evolution · Quantitative Biology 2011-12-22 Gilles Guillot , Sabrina Renaud , Ronan Ledevin , Joahn Michaux , Julien Claude

Crop production needs to increase in a sustainable manner to meet the growing global demand for food. To identify crop varieties with high yield potential, plant scientists and breeders evaluate the performance of hundreds of lines in…

Image and Video Processing · Electrical Eng. & Systems 2019-06-25 Ali Moghimi , Ce Yang , James A. Anderson

A database of images of approximately 960 unique plants belonging to 12 species at several growth stages is made publicly available. It comprises annotated RGB images with a physical resolution of roughly 10 pixels per mm. To standardise…

Computer Vision and Pattern Recognition · Computer Science 2017-11-16 Thomas Mosgaard Giselsson , Rasmus Nyholm Jørgensen , Peter Kryger Jensen , Mads Dyrmann , Henrik Skov Midtiby

Training of neural networks for automated diagnosis of pigmented skin lesions is hampered by the small size and lack of diversity of available datasets of dermatoscopic images. We tackle this problem by releasing the HAM10000 ("Human…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Philipp Tschandl , Cliff Rosendahl , Harald Kittler

Automated livestock monitoring is crucial for precision farming, but robust computer vision models are hindered by a lack of datasets reflecting real-world group challenges. We introduce the 8-Calves dataset, a challenging benchmark for…

Computer Vision and Pattern Recognition · Computer Science 2025-10-24 Xuyang Fang , Sion Hannuna , Neill Campbell , Edwin Simpson

Herbarium sheets present a unique view of the world's botanical history, evolution, and diversity. This makes them an all-important data source for botanical research. With the increased digitisation of herbaria worldwide and the advances…

Computer Vision and Pattern Recognition · Computer Science 2021-05-31 Riccardo de Lutio , Damon Little , Barbara Ambrose , Serge Belongie

Pollinator insects such as honeybees and bumblebees are vital to global food production and ecosystem stability, yet their populations are declining due to anthropogenic and environmental stressors. Scalable, automated monitoring in…

Computer Vision and Pattern Recognition · Computer Science 2025-09-10 Ahmed Emam , Mohamed Elbassiouny , Julius Miller , Patrick Donworth , Sabine Seidel , Ribana Roscher

To ensure animal welfare and effective management in pig farming, monitoring individual behavior is a crucial prerequisite. While monitoring tasks have traditionally been carried out manually, advances in machine learning have made it…

Computer Vision and Pattern Recognition · Computer Science 2025-12-02 Jonathan Henrich , Christian Post , Maximilian Zilke , Parth Shiroya , Emma Chanut , Amir Mollazadeh Yamchi , Ramin Yahyapour , Thomas Kneib , Imke Traulsen

Plant phenotyping is typically a time-consuming and expensive endeavor, requiring large groups of researchers to meticulously measure biologically relevant plant traits, and is the main bottleneck in understanding plant adaptation and the…

In an effort to catalog insect biodiversity, we propose a new large dataset of hand-labelled insect images, the BIOSCAN-Insect Dataset. Each record is taxonomically classified by an expert, and also has associated genetic information…

In this paper, we propose a re-weighted elastic net (REN) model for biometric recognition. The new model is applied to data separated into geometric and color spatial components. The geometric information is extracted using a fast cartoon -…

Computer Vision and Pattern Recognition · Computer Science 2015-07-28 Juan C. Moreno , V. B. S. Prasath , Gil Santos , Hugo Proenca

Personalized animal image generation is challenging due to rich appearance cues and large morphological variability. Existing approaches often exhibit feature misalignment across domains, which leads to identity drift. We present…

Computer Vision and Pattern Recognition · Computer Science 2026-04-28 Chen Liu , Haitao Wu , Kafeng Wang , Weiran Huang

The widely used genetic pleiotropic analysis of multiple phenotypes are often designed for examining the relationship between common variants and a few phenotypes. They are not suited for both high dimensional phenotypes and high…

Machine Learning · Statistics 2015-12-04 Panpan Wang , Mohammad Rahman , Li Jin , Momiao Xiong

For a globally recognized planting breeding organization, manually-recorded field observation data is crucial for plant breeding decision making. However, certain phenotypic traits such as plant color, height, kernel counts, etc. can only…

Computer Vision and Pattern Recognition · Computer Science 2021-03-23 Saeed Khaki , Nima Safaei , Hieu Pham , Lizhi Wang

In this paper we publish the largest identity-annotated Holstein-Friesian cattle dataset Cows2021 and a first self-supervision framework for video identification of individual animals. The dataset contains 10,402 RGB images with labels for…

Computer Vision and Pattern Recognition · Computer Science 2021-05-06 Jing Gao , Tilo Burghardt , William Andrew , Andrew W. Dowsey , Neill W. Campbell

Plant traits such as leaf carbon content and leaf mass are essential variables in the study of biodiversity and climate change. However, conventional field sampling cannot feasibly cover trait variation at ecologically meaningful spatial…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Eya Cherif , Arthur Ouaknine , Luke A. Brown , Phuong D. Dao , Kyle R. Kovach , Bing Lu , Daniel Mederer , Hannes Feilhauer , Teja Kattenborn , David Rolnick

Tree species identification using bark images is a challenging problem that could prove useful for many forestry related tasks. However, while the recent progress in deep learning showed impressive results on standard vision problems, a…

Computer Vision and Pattern Recognition · Computer Science 2018-08-01 Mathieu Carpentier , Philippe Giguère , Jonathan Gaudreault

Wheat varieties show a large diversity of traits and phenotypes. Linking them to genetic variability is essential for shorter and more efficient wheat breeding programs. Newly desirable wheat variety traits include disease resistance to…

Computation and Language · Computer Science 2024-01-17 Claire Nédellec , Clara Sauvion , Robert Bossy , Mariya Borovikova , Louise Deléger

Agricultural production is facing severe challenges in the next decades induced by climate change and the need for sustainability, reducing its impact on the environment. Advancements in field management through non-chemical weeding by…

Computer Vision and Pattern Recognition · Computer Science 2025-08-12 Elias Marks , Jonas Bömer , Federico Magistri , Anurag Sah , Jens Behley , Cyrill Stachniss