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We present a comparison between various algorithms of inference of covariance and precision matrices in small datasets of real vectors, of the typical length and dimension of human brain activity time series retrieved by functional Magnetic…

Statistical Mechanics · Physics 2023-02-07 Miguel Ibáñez-Berganza , Carlo Lucibello , Francesca Santucci , Tommaso Gili , Andrea Gabrielli

A central goal of modern magnetic resonance imaging (MRI) is to reduce the time required to produce high-quality images. Efforts have included hardware and software innovations such as parallel imaging, compressed sensing, and deep…

Medical Physics · Physics 2023-03-27 Yihong Xu , Chad W. Farris , Stephan W. Anderson , Xin Zhang , Keith A. Brown

Multimodal magnetic resonance imaging (MRI) is crucial for brain tumor segmentation, with many methods leveraging its four key modalities to capture complementary information for effective sub-region analysis. However, the absence of…

Artificial Intelligence · Computer Science 2026-05-19 Sha Tao , Jiao Pan , Yu Guo , Chao Yao

Motivation: In many fMRI studies, respiratory signals are often missing or of poor quality. Therefore, it could be highly beneficial to have a tool to extract respiratory variation (RV) waveforms directly from fMRI data without the need for…

Machine Learning · Computer Science 2024-05-02 Abdoljalil Addeh , Fernando Vega , Rebecca J. Williams , G. Bruce Pike , M. Ethan MacDonald

A Brain Computer Interface (BCI) connects the human brain to the outside world, providing a direct communication channel. Electroencephalography (EEG) signals are commonly used in BCIs to reflect cognitive patterns related to motor function…

Machine Learning · Computer Science 2025-11-19 Abdullah Al Shiam , Md. Khademul Islam Molla , Abu Saleh Musa Miah , Md. Abdus Samad Kamal

Functional Magnetic Resonance Imaging (fMRI) data is a widely used kind of four-dimensional biomedical data, which requires effective compression. However, fMRI compressing poses unique challenges due to its intricate temporal dynamics, low…

Image and Video Processing · Electrical Eng. & Systems 2024-03-01 Ruoran Li , Runzhao Yang , Wenxin Xiang , Yuxiao Cheng , Tingxiong Xiao , Jinli Suo

Cardiac magnetic resonance imaging (MRI) requires reconstructing a real-time video of a beating heart from continuous highly under-sampled measurements. This task is challenging since the object to be reconstructed (the heart) is…

Image and Video Processing · Electrical Eng. & Systems 2024-01-12 Johannes F. Kunz , Stefan Ruschke , Reinhard Heckel

Functional magnetic resonance imaging (fMRI) is a crucial technology for gaining insights into cognitive processes in humans. Data amassed from fMRI measurements result in volumetric data sets that vary over time. However, analysing such…

Neurons and Cognition · Quantitative Biology 2020-10-23 Bastian Rieck , Tristan Yates , Christian Bock , Karsten Borgwardt , Guy Wolf , Nicholas Turk-Browne , Smita Krishnaswamy

Over the past decade, several studies have explored the potential of magnetic resonance fingerprinting (MRF) for the quantification of brain hemodynamics, oxygenation, and perfusion. Recent advances in simulation models and reconstruction…

Signal Processing · Electrical Eng. & Systems 2025-12-16 T. Coudert , A. Delphin , A. Barrier , E L Barbier , B. Lemasson , J M Warnking , T. Christen

Automatic detection of brain neoplasm in Magnetic Resonance Imaging (MRI) is gaining importance in many medical diagnostic applications. This report presents two improvements for brain neoplasm detection in MRI data: an advanced…

Computer Vision and Pattern Recognition · Computer Science 2021-01-26 Nilanjan Sinhababu , Monalisa Sarma , Debasis Samanta

Functional data analysis finds widespread application across various fields. While functional data are intrinsically infinite-dimensional, in practice, they are observed only at a finite set of points, typically over a dense grid. As a…

Methodology · Statistics 2025-10-29 Ana Carolina da Cruz , Camila P. E. de Souza , Pedro H. T. O. Sousa

Most brain disorders are very heterogeneous in terms of their underlying biology and developing analysis methods to model such heterogeneity is a major challenge. A promising approach is to use probabilistic regression methods to estimate…

Machine Learning · Statistics 2018-12-03 Seyed Mostafa Kia , Christian F. Beckmann , Andre F. Marquand

Whole-brain computational modeling based on structural connectivity has shown great promise in successfully simulating fMRI BOLD signals with temporal co-activation patterns that are highly similar to empirical functional connectivity…

Neurons and Cognition · Quantitative Biology 2019-11-14 Neda Kaboodvand , Martijn P van den Heuvel , Peter Fransson

Magnetic resonance imaging (MRI) is commonly used for brain tumor segmentation, which is critical for patient evaluation and treatment planning. To reduce the labor and expertise required for labeling, weakly-supervised semantic…

Computer Vision and Pattern Recognition · Computer Science 2023-12-04 Yu-Jen Chen , Xinrong Hu , Yiyu Shi , Tsung-Yi Ho

Multi-modal magnetic resonance imaging (MRI) is essential in clinics for comprehensive diagnosis and surgical planning. Nevertheless, the segmentation of multi-modal MR images tends to be time-consuming and challenging. Convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2019-08-07 Cheng Li , Hui Sun , Zaiyi Liu , Meiyun Wang , Hairong Zheng , Shanshan Wang

This study introduces a pioneering approach in brain-computer interface (BCI) technology, featuring our novel concept of high-level visual imagery for non-invasive electroencephalography (EEG)-based communication. High-level visual imagery,…

Human-Computer Interaction · Computer Science 2025-11-03 Byoung-Hee Kwon , Minji Lee , Seong-Whan Lee

The statistical analysis of group studies in neuroscience is particularly challenging due to the complex spatio-temporal nature of the data, its multiple levels and the inter-individual variability in brain responses. In this respect,…

Methodology · Statistics 2025-05-15 Nicolò Margaritella , Vanda Inácio , Ruth King

Brain function is organized in coordinated modes of spatio-temporal activity (functional networks) exhibiting an intrinsic baseline structure with variations under different experimental conditions. Existing approaches for uncovering such…

Methodology · Statistics 2019-02-13 Joshua Lukemire , Suprateek Kundu , Giuseppe Pagnoni , Ying Guo

Alzheimer's disease (AD) is a neurodegenerative disorder marked by memory loss and cognitive decline, making early detection vital for timely intervention. However, early diagnosis is challenging due to the heterogeneous presentation of…

Neurons and Cognition · Quantitative Biology 2025-09-24 Ali Khazaee , Abdolreza Mohammadi , Ruairi O'Reilly

In recent years, functional magnetic resonance imaging (fMRI) has been widely utilized to diagnose neurological disease, by exploiting the region of interest (RoI) nodes as well as their connectivities in human brain. However, most of…

Image and Video Processing · Electrical Eng. & Systems 2023-09-18 Xiangzhu Meng , Qiang Liu , Shu Wu , Liang Wang
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