Related papers: Minimum Decomposition on Maxmin Trees
A metric phylogenetic tree relating a collection of taxa induces weighted rooted triples and weighted quartets for all subsets of three and four taxa, respectively. New intertaxon distances are defined that can be calculated from these…
This paper presents a MaxSAT benchmark focused on the identification of Maximum Probability Minimal Cut Sets (MPMCSs) in fault trees. We address the MPMCS problem by transforming the input fault tree into a weighted logical formula that is…
By considering the parity of the degrees and levels of nodes in increasing trees, a new combinatorial interpretation for the coefficients of the Taylor expansions of the Jacobi elliptic functions is found. As one application of this new…
The problem of maximum-likelihood (ML) estimation of discrete tree-structured distributions is considered. Chow and Liu established that ML-estimation reduces to the construction of a maximum-weight spanning tree using the empirical mutual…
This paper describes a generalization of previous methods for constructing tree-structured belief network with hidden variables. The major new feature of the described method is the ability to produce a tree decomposition even when there…
Understanding the evolution of a set of genes or species is a fundamental problem in evolutionary biology. The problem we study here takes as input a set of trees describing {possibly discordant} evolutionary scenarios for a given set of…
We define a notion of substitution on colored binary trees that we call substreetution. We show that a fixed point by a substreetution may be (or not) almost periodic, thus the closure of the orbit under $\mathbb{F}_2^+$-action may (or not)…
In this paper we study a polynomial time algorithms that for an input $A\subseteq {B_m}$ outputs a decision tree for $A$ of minimum depth. This problem has many applications that include, to name a few, computer vision, group testing, exact…
Graph polynomials encode fundamental combinatorial invariants of graphs. Their computation is investigated using tree and path decomposition frameworks, with formal definitions of treewidth, k-trees, and pathwidth establishing the…
The Ward numbers $W(n,k)$ combinatorially enumerate set partitions with block sizes $\geq 2$ and phylogenetic trees (total partition trees). We prove that $W(n,k)$ also counts \emph{increasing Schr\"oder trees} by verifying they satisfy…
The Minimum Size Tree Decomposition (MSTD) and Minimum Size Path Decomposition (MSPD) problems ask for a given n-vertex graph G and integer k, what is the minimum number of bags of a tree decomposition (respectively, path decomposition) of…
A distributed proof (also known as local certification, or proof-labeling scheme) is a mechanism to certify that the solution to a graph problem is correct. It takes the form of an assignment of labels to the nodes, that can be checked…
We develop basic cluster theory from an elementary point of view using a variation of binary trees which we call mixed cobinary trees. We show that the number of isomorphism classes of such trees is given by the Catalan number Cn where n is…
Extreme classification problems are multiclass and multilabel classification problems where the number of outputs is so large that straightforward strategies are neither statistically nor computationally viable. One strategy for dealing…
We give an independent combinatorial proof of Nogin's Theorem concerning the minimum distance of the Grassmann codes using a special decomposition of the Grassmannians. We use the same idea to also compute the second minimum weight of the…
It is well known that finding extremal values and structures can be hard in weighted graphs. However, if the weights are random, this problem can become way easier. In this paper, we examine the minimal weight of a union of $k$…
We study the problem of partitioning a set of $n$ objects in a metric space into $k$ clusters $V_1,\dots,V_k$. The quality of the clustering is measured by considering the vector of cluster costs and then minimizing some monotone symmetric…
A $k$-universal permutation, or $k$-superpermutation, is a permutation that contains all permutations of length $k$ as patterns. The problem of finding the minimum length of a $k$-superpermutation has recently received significant attention…
We state a kind of Euclidian division theorem: given a polynomial P(x) and a divisor d of the degree of P, there exist polynomials h(x),Q(x),R(x) such that P(x) = h(Q(x)) +R(x), with deg h=d. Under some conditions h,Q,R are unique, and Q is…
Given an undirected graph $G = (V, E)$ and a weight function $w:E \to \mathbb{R}$, the \textsc{Minimum Dominating Tree} problem asks to find a minimum weight sub-tree of $G$, $T = (U, F)$, such that every $v \in V \setminus U$ is adjacent…