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String edit distances have been used for decades in applications ranging from spelling correction and web search suggestions to DNA analysis. Most string edit distances are variations of the Levenshtein distance and consider only…

Genomics · Quantitative Biology 2022-05-12 Taylor Petty , Jan Hannig , Tunde I Huszar , Hari Iyer

Edit distance, also known as Levenshtein distance, is an essential way to compare two strings that proved to be particularly useful in the analysis of genetic sequences and natural language processing. However, edit distance is a discrete…

Machine Learning · Computer Science 2019-04-30 Evgenii Ofitserov , Vasily Tsvetkov , Vadim Nazarov

Efficient computation or approximation of Levenshtein distance, a widely-used metric for evaluating sequence similarity, has attracted significant attention with the emergence of DNA storage and other biological applications. Sequence…

Machine Learning · Computer Science 2024-04-01 Xiang Wei , Alan J. X. Guo , Sihan Sun , Mengyi Wei , Wei Yu

The Levenshtein distance is an important tool for the comparison of symbolic sequences, with many appearances in genome research, linguistics and other areas. For efficient applications, an approximation by a distance of smaller…

Quantitative Methods · Quantitative Biology 2007-05-23 Michael Baake , Uwe Grimm , Robert Giegerich

The edit distance (a.k.a. the Levenshtein distance) between two strings is defined as the minimum number of insertions, deletions or substitutions of symbols needed to transform one string into another. The problem of computing the edit…

Computational Complexity · Computer Science 2017-08-17 Arturs Backurs , Piotr Indyk

Dictionary lookup methods are popular in dealing with ambiguous letters which were not recognized by Optical Character Readers. However, a robust dictionary lookup method can be complex as apriori probability calculation or a large…

Information Theory · Computer Science 2011-01-07 Rishin Haldar , Debajyoti Mukhopadhyay

In many applications, it is necessary to determine the similarity of two strings. A widely-used notion of string similarity is the edit distance: the minimum number of insertions, deletions, and substitutions required to transform one…

cmp-lg · Computer Science 2008-02-03 Eric Sven Ristad , Peter N. Yianilos

In this paper, we present a new approach dedicated to correcting the spelling errors of the Arabic language. This approach corrects typographical errors like inserting, deleting, and permutation. Our method is inspired from the Levenshtein…

Computation and Language · Computer Science 2012-08-23 Gueddah Hicham

With the emergence of new storage and communication methods, the insertion, deletion, and substitution (IDS) channel has attracted considerable attention. However, many topics on the IDS channel and the associated Levenshtein distance…

Information Theory · Computer Science 2025-12-15 Alan J. X. Guo , Sihan Sun , Xiang Wei , Mengyi Wei , Xin Chen

This paper presents a novel approach to calculating the Levenshtein (edit) distance within the framework of Fully Homomorphic Encryption (FHE), specifically targeting third-generation schemes like TFHE. Edit distance computations are…

Cryptography and Security · Computer Science 2025-08-21 Wouter Legiest , Jan-Pieter D'Anvers , Bojan Spasic , Nam-Luc Tran , Ingrid Verbauwhede

Modern neural sequence generation models are built to either generate tokens step-by-step from scratch or (iteratively) modify a sequence of tokens bounded by a fixed length. In this work, we develop Levenshtein Transformer, a new partially…

Computation and Language · Computer Science 2019-10-29 Jiatao Gu , Changhan Wang , Jake Zhao

List decoding of insertions and deletions in the Levenshtein metric is considered. The Levenshtein distance between two sequences is the minimum number of insertions and deletions needed to turn one of the sequences into the other. In this…

Information Theory · Computer Science 2017-11-20 Antonia Wachter-Zeh

Storing information in DNA molecules is of great interest because of its advantages in longevity, high storage density, and low maintenance cost. A key step in the DNA storage pipeline is to efficiently cluster the retrieved DNA sequences…

Machine Learning · Computer Science 2022-07-12 Alan J. X. Guo , Cong Liang , Qing-Hu Hou

The Damerau-Levenshtein distance between two sequences is the minimum number of operations (deletions, insertions, substitutions, and adjacent transpositions) required to convert one sequence into another. Notwithstanding a long history of…

Information Theory · Computer Science 2025-07-08 Zuo Ye , Gennian Ge

The normalized edit distance is one of the distances derived from the edit distance. It is useful in some applications because it takes into account the lengths of the two strings compared. The normalized edit distance is not defined in…

Neural and Evolutionary Computing · Computer Science 2013-12-09 Muhammad Marwan Muhammad Fuad

The tutorial describes the concept of edit distances applied to research and commercial contexts. We use Translation Edit Rate (TER), Levenshtein, Damerau-Levenshtein, Longest Common Subsequence and $n$-gram distances to demonstrate the…

Computation and Language · Computer Science 2024-10-10 Félix do Carmo , Diptesh Kanojia

String similarity, longest common subsequence and shortest edit scripts are the triplets of problem that related to each other. There are different algorithms exist to generate edit script by solving longest common subsequence problem. This…

Data Structures and Algorithms · Computer Science 2022-08-19 P. Prakash Maria Liju

A measure of similarity between text embeddings can be considered adequate only if it adheres to the human perception of similarity between texts. In this paper, we introduce the distance-to-distance ratio (DDR), a novel measure of…

Computation and Language · Computer Science 2026-01-27 Abdullah Qureshi , Kenneth Rice , Alexander Wolpert

Deep metric learning employs deep neural networks to embed instances into a metric space such that distances between instances of the same class are small and distances between instances from different classes are large. In most existing…

Machine Learning · Computer Science 2019-12-05 Ahmed Abdelwahab , Niels Landwehr

In the Levenshtein's sequence reconstruction problem a codeword is transmitted through $N$ channels and in each channel a set of errors is introduced to the transmitted word. In previous works, the restriction that each channel provides a…

Information Theory · Computer Science 2024-06-21 Ville Junnila , Tero Laihonen , Tuomo Lehtilä
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