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Related papers: Noise driven phase transitions in eco-evolutionary…

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We analyze order-disorder phase transitions driven by noise that occur in two kinds of network models closely related to the self-propelled model proposed by Vicsek et. al. to describe the collective motion of groups of organisms…

Disordered Systems and Neural Networks · Physics 2008-02-27 Jaime A. Pimentel , Maximino Aldana , Cristián Huepe , Hernán Larralde

Organisms adapt to volatile environments by integrating sensory information with internal memory, yet their information processing is constrained by resource limitations. Such limitations can fundamentally alter optimal estimation…

Biological Physics · Physics 2025-11-14 Takehiro Tottori , Tetsuya J. Kobayashi

We analyze the influence of long-range correlated (colored) external noise on extinction phase transitions in growth and spreading processes. Uncorrelated environmental noise (i.e., temporal disorder) was recently shown to give rise to an…

Statistical Mechanics · Physics 2018-08-15 Alexander H. O. Wada , Matthew Small , Thomas Vojta

Cells can utilize chemical communication to exchange information and coordinate their behavior in the presence of noise. Communication can reduce noise to shape a collective response, or amplify noise to generate distinct phenotypic…

Molecular Networks · Quantitative Biology 2019-09-24 David T. Gonzales , T-Y Dora Tang , Christoph Zechner

Transport phenomena are ubiquitous throughout the science, engineering and technology disciplines as it concerns energy, mass, charge and information exchange between systems. In particular, energy transport in the nanoscale regime has…

Quantum Physics · Physics 2018-07-26 Chikako Uchiyama , William J. Munro , Kae Nemoto

Species interactions (ranging from direct predator prey relationships to indirect effects mediated by the environment) are central to ecosystem balance and biodiversity. While empirical methods for measuring these interactions exist, their…

Populations and Evolution · Quantitative Biology 2025-08-27 Javier Aguilar , Samir Suweis , Amos Maritan , Sandro Azaele

Recent developments of eco-evolutionary models have shown that evolving feedbacks between behavioral strategies and the environment of game interactions, leading to changes in the underlying payoff matrix, can impact the underlying…

Physics and Society · Physics 2024-06-10 Katherine Betz , Feng Fu , Naoki Masuda

Biological systems operate under persistent noise, which can alter system states and induce transitions between attractors. Here, we study the attractor dynamics of Boolean networks focusing on the transitions between attractors induced by…

Molecular Networks · Quantitative Biology 2026-03-05 Byungjoon Min , Jeehye Choi , Reinhard Laubenbacher

In this thesis we aim to analyze and quantify the energetic and information contents that can be extracted from a dynamical system subject to the external environment. The latter is usually assumed to be deleterious for the feasibility of…

Quantum Physics · Physics 2018-05-07 Stefano Gherardini

Dynamic environments shape diverse dynamics in evolutionary game systems. We introduce spatial heterogeneity of resources into the prisoner's dilemma game model to explore coevolutionary game dynamics with environmental feedback. The…

Populations and Evolution · Quantitative Biology 2025-02-17 Yi-Duo Chen , Jian-Yue Guan , Zhi-Xi Wu

Both evolution and ecology have long been concerned with the impact of variable environmental conditions on observed levels of genetic diversity within and between species. We model the evolution of a quantitative trait under selection that…

Populations and Evolution · Quantitative Biology 2014-11-17 Hannes Svardal , Claus Rueffler , Joachim Hermisson

The symbiotic relationship between the frameworks of classical game theory and evolutionary game theory is well-established. However, evolutionary game theorists have mostly tapped into the classical game of complete information where…

Populations and Evolution · Quantitative Biology 2025-04-04 Arunava Patra , Joy Das Bairagya , Sagar Chakraborty

Environmental feedback mechanisms are ubiquitous in real-world complex systems. In this study, we incorporate a homogeneous environment into the evolutionary dynamics of a three-state system comprising cooperators, defectors, and empty…

Adaptation and Self-Organizing Systems · Physics 2025-10-10 Yi-Duo Chen , Zhi-Xi Wu , Jian-Yue Guan

Due to inherent noise in intracellular networks cellular decisions can be random, so genetically identical cells can display different phenotypic behavior even in identical environments. Most previous work in understanding the…

Molecular Networks · Quantitative Biology 2015-06-15 Michael Assaf , Elijah Roberts , Zaida Luthey-Schulten , Nigel Goldenfeld

1. Theoretical models pertaining to feedbacks between ecological and evolutionary processes are prevalent in multiple biological fields. An integrative overview is currently lacking, due to little crosstalk between the fields and the use of…

Migration between different habitats is ubiquitous among biological populations. In this Letter, we study a simple quasispecies model for evolution in two different habitats, with different fitness landscapes, coupled through one-way…

Populations and Evolution · Quantitative Biology 2010-12-23 Bartlomiej Waclaw , Rosalind J. Allen , Martin R. Evans

The natural evolution of life seems to proceed through steps characterized by phases of relatively rapid changes, followed by longer, more stable periods. In the light of the string-theory derived physical scenario proposed in [1], we…

General Physics · Physics 2007-12-06 Andrea Gregori

Understanding under which conditions the increase of systems complexity is evolutionary advantageous, and how this trend is related to the modulation of the intrinsic noise, are fascinating issues of utmost importance for synthetic and…

Molecular Networks · Quantitative Biology 2018-08-01 Fabrizio Pucci , Marianne Rooman

Evolutionary transitions among ecological interactions are widely known, although their detailed dynamics remain absent for most population models. Adaptive dynamics has been used to illustrate how the parameters of population models might…

Populations and Evolution · Quantitative Biology 2022-11-14 Luciano Stucchi , Javier Galeano , Juan Manuel Pastor , José María Iriondo , José A. Cuesta

Understanding how the structure of community interactions is modified by coevolution is vital for understanding system responses to change at all scales. However, in absence of a group selection process, collective community behaviours…

Populations and Evolution · Quantitative Biology 2015-06-23 Daniel A. Power , Richard A. Watson , Eörs Szathmáry , Rob Mills , Simon T Powers , C Patrick Doncaster , Błażej Czapp