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We extend our super-resolution and emulation framework for cosmological dark matter simulations to include hydrodynamics. We present a two-stage deep learning model to emulate high-resolution (HR-HydroSim) baryonic fields from…

Cosmology and Nongalactic Astrophysics · Physics 2025-07-23 Fatemeh Hafezianzadeh , Xiaowen Zhang , Yueying Ni , Rupert A. C. Croft , Tiziana DiMatteo , Mahdi Qezlou , Simeon Bird

We study the distribution of low-redshift Ly$\alpha$ clouds in a CDM model using numerical simulations including photoionization and cooling of the baryonic component. The ionizing background is found to be efficient enough to keep most of…

Astrophysics · Physics 2016-08-30 Patrick Petitjean , Jan P. Mücket , Ron Kates

Lyman-alpha forest data probing the post-reionization Universe shows surprisingly large opacity fluctuations over rather large ($\ge$50 comoving Mpc/h) spatial scales. We model these fluctuations using a hybrid approach utilizing the large…

Cosmology and Nongalactic Astrophysics · Physics 2017-03-21 Jonathan Chardin , Ewald Puchwein , Martin G. Haehnelt

In this paper we review the importance of the Lyman alpha forest as a probe of structure formation in the universe. We first discuss the statistics used to describe the Lyman alpha forest and the numerical techniques used to produce…

Astrophysics · Physics 2007-05-23 Marie E. Machacek , Greg L. Bryan , Peter Anninos , Avery Meiksin , Michael L. Norman

The inference of astrophysical and cosmological properties from the Lyman-$\alpha$ forest conventionally relies on summary statistics of the transmission field that carry useful but limited information. We present a deep learning framework…

Cosmology and Nongalactic Astrophysics · Physics 2024-09-11 Parth Nayak , Michael Walther , Daniel Gruen , Sreyas Adiraju

We simulate the Lya forest in a standard CDM universe using a 2-level hierarchical grid code to evolve the dark and baryonic matter components self-consistently. We solve the time-dependent ionization equations for hydrogen and helium,…

Astrophysics · Physics 2009-10-28 Yu Zhang , Peter Anninos , Michael L. Norman , Avery Meiksin

Context. One important step in the statistical analysis of the Ly-alpha forest data is the study of their second order properties. Usually, this is accomplished by means of the two-point correlation function or, alternatively, the…

Astrophysics · Physics 2009-11-13 R. Vio , V. D'Odorico , H. Stoyan , D. Stoyan

The Lyman-alpha forest is the large-scale structure probe for which we appear to have modeling control to the highest wavenumbers. This makes the Lyman-alpha forest of great interest for constraining the warmness/fuzziness of dark matter…

Cosmology and Nongalactic Astrophysics · Physics 2021-10-27 Bayu Wilson , Vid Iršič , Matthew McQuinn

The Lyman-$\alpha$ absorption spectrum associated with photons traversing the intergalactic medium allows us to probe the linear matter power spectrum down to relatively small distance scales. Finding ways of accurately evaluating…

Cosmology and Nongalactic Astrophysics · Physics 2023-01-04 Keith R. Dienes , Fei Huang , Jeff Kost , Brooks Thomas , Hai-Bo Yu

We have measured the distribution function of the flux decrement caused by Lyman alpha forest absorption in a new sample of high resolution QSO spectra. The observations are compared to the results from two simulations of the Lya forest: an…

Line-intensity mapping (LIM) is quickly attracting attention as an alternative technique to probe large-scale structure and galaxy formation and evolution at high redshift. LIM one-point statistics are motivated because they provide access…

Cosmology and Nongalactic Astrophysics · Physics 2024-03-06 José Luis Bernal

We present a measurement of the Lyman alpha flux probability distribution function (PDF) measured from a set of eight high resolution quasar spectra with emission redshifts at 3.3 < z < 3.8. We carefully study the effect of metal absorption…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-03 F. Calura , E. Tescari , V. D'Odorico , M. Viel , S. Cristiani , T. -S. Kim , J. S. Bolton

The Ly$\alpha$ emission line is one of the most promising probes of cosmic reionisation but isolating the signature of a change in the ionisation state of the IGM is challenging because of intrinsic evolution and internal radiation transfer…

This is the second paper in a series whose aim is to predict the power spectrum of intensity and polarized intensity from cosmic reionization fronts. After building the analytic models for intensity and polarized intensity calculations in…

Cosmology and Nongalactic Astrophysics · Physics 2023-05-31 Emily Koivu , Heyang Long , Yuanyuan Yang , Christopher M. Hirata

It appears inevitable that reionization processes would have produced large-scale temperature fluctuations in the intergalactic medium. Using toy temperature models and detailed heating histories from cosmological simulations of HeII…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-20 Matthew McQuinn , Lars Hernquist , Adam Lidz , Matias Zaldarriaga

We present constraints on the masses of extremely light bosons dubbed fuzzy dark matter from Lyman-$\alpha$ forest data. Extremely light bosons with a De Broglie wavelength of $\sim 1$ kpc have been suggested as dark matter candidates that…

Cosmology and Nongalactic Astrophysics · Physics 2017-08-01 Vid Iršič , Matteo Viel , Martin G. Haehnelt , James S. Bolton , George D. Becker

Lyman limit and damped Lyman-alpha absorption systems probe the distribution of collapsed, cold gas at high redshift. Numerical simulations that incorporate gravity and gas dynamics can predict the abundance of such absorbers in…

Astrophysics · Physics 2009-10-28 Jeffrey P. Gardner , Neal Katz , Lars Hernquist , David H. Weinberg

Studying the matter distribution in the universe through the Lyman-$\alpha$ forest allows us to constrain small-scale physics in the high-redshift regime. Spectroscopic quasar surveys are generating increasingly large datasets that require…

Cosmology and Nongalactic Astrophysics · Physics 2026-04-23 Josue De-Santiago , Rafael Gutiérrez-Balboa , Gustavo Niz , Alma X. González-Morales

We introduce a new set of large scale, high resolution hydrodynamical simulations of the intergalactic medium: the Sherwood simulation suite. These are performed in volumes 10^3-160^3 h^-3 comoving Mpc^{3}, span almost four orders of…

Cosmology and Nongalactic Astrophysics · Physics 2016-12-07 James S. Bolton , Ewald Puchwein , Debora Sijacki , Martin G. Haehnelt , Tae-Sun Kim , Avery Meiksin , John A. Regan , Matteo Viel