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Related papers: Distinguishing graphs with two integer matrices

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Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

A new heuristic based on vertex invariants is developed to rapidly distinguish non-isomorphic graphs to a desired level of accuracy. The method is applied to sample subgraphs from an E.coli protein interaction network, and as a probe for…

Quantitative Methods · Quantitative Biology 2009-11-13 Kim Baskerville , Maya Paczuski

We investigate when a complete graph $K_n$ with some edges deleted is determined by its adjacency spectrum. It is shown to be the case if the deleted edges form a matching, a complete graph $K_m$ provided $m \leq n-2$, or a complete…

Combinatorics · Mathematics 2012-11-27 Marc Cámara , Willem H. Haemers

Classical graph matching aims to find a node correspondence between two unlabeled graphs of known topologies. This problem has a wide range of applications, from matching identities in social networks to identifying similar biological…

Signal Processing · Electrical Eng. & Systems 2024-10-28 Hang Liu , Anna Scaglione , Hoi-To Wai

Graph matching aims at finding the vertex correspondence between two unlabeled graphs that maximizes the total edge weight correlation. This amounts to solving a computationally intractable quadratic assignment problem. In this paper we…

Machine Learning · Statistics 2019-07-23 Zhou Fan , Cheng Mao , Yihong Wu , Jiaming Xu

An isomorphism between two graphs is a bijection between their vertices that preserves the edges. We consider the problem of determining whether two finite undirected weighted graphs are isomorphic, and finding an isomorphism relating them…

Optimization and Control · Mathematics 2016-11-03 Reza Takapoui , Stephen Boyd

Let $G$ be an undirected graph on $n$ vertices and let $S(G)$ be the set of all $n \times n$ real symmetric matrices whose nonzero off-diagonal entries occur in exactly the positions corresponding to the edges of $G$. The inverse eigenvalue…

Spectral Theory · Mathematics 2014-01-10 Polona Oblak , Helena Šmigoc

In this article, we propose a new type of square matrix associated with an undirected graph by trading off the naturally imbedded symmetry in them. The proposed matrix is defined using the neighbourhood sets of the vertices. It is called as…

Discrete Mathematics · Computer Science 2019-03-14 Sivakumar Karunakaran , Lavanya Selvaganesh

In this monography, it is proposed to consider the concepts of spectra of edge cuts and edge cycles of a graph as a basic mathematical structure for solving the problem of graph isomorphism. An edge cut is defined by an edge and the…

Combinatorics · Mathematics 2024-06-13 Sergey Kurapov , Maxim Davidovsky

Graph neural networks can be effectively applied to find solutions for many real-world problems across widely diverse fields. The success of graph neural networks is linked to the message-passing mechanism on the graph, however, the…

Machine Learning · Computer Science 2022-01-06 Yan Pang , Chao Liu

Several researchers have recently explored various graph parameters that can or cannot be characterized by the spectrum of a matrix associated with a graph. In this paper we show that several NP-hard zero forcing numbers are not…

Combinatorics · Mathematics 2022-04-25 Aida Abiad , Boris Brimkov , Jane Breen , Thomas R. Cameron , Himanshu Gupta , Ralihe R. Villagrán

We consider a statistical model for the problem of finding subgraphs with specified topology in an otherwise random graph. This task plays an important role in the analysis of social and biological networks. In these types of networks,…

Statistics Theory · Mathematics 2017-10-24 Hamid Javadi , Andrea Montanari

We consider a class $G(S^n)$ of orientation preserving Morse-Smale diffeomorphisms of the sphere $S^{n}$ of dimension $n>3$ in assumption that invariant manifolds of different saddle periodic points have no intersection. We put in a…

Dynamical Systems · Mathematics 2020-12-02 Vyachesval Grines , Elena Gurevich , Olga Pochinka , Dmitrii Malyshev

An \emph{s-graph} is a graph with two kinds of edges: \emph{subdivisible} edges and \emph{real} edges. A \emph{realisation} of an s-graph $B$ is any graph obtained by subdividing subdivisible edges of $B$ into paths of arbitrary length (at…

Discrete Mathematics · Computer Science 2013-09-05 Benjamin Lévêque , David Y. Lin , Frédéric Maffray , Nicolas Trotignon

We consider the problem of estimating the topology of multiple networks from nodal observations, where these networks are assumed to be drawn from the same (unknown) random graph model. We adopt a graphon as our random graph model, which is…

Machine Learning · Statistics 2022-02-14 Madeline Navarro , Santiago Segarra

Two graphs having the same spectrum are said to be cospectral. Two graphs such that the absolute values of their nonzero eigenvalues coincide are singularly cospectral graphs. Cospectrality implies singular cospectrality, but the converse…

Combinatorics · Mathematics 2024-08-15 Cristian M. Conde , Ezequiel Dratman , Luciano N. Grippo , Melina Privitelli

Inferring graph structure from observations on the nodes is an important and popular network science task. Departing from the more common inference of a single graph and motivated by social and biological networks, we study the problem of…

Machine Learning · Statistics 2020-10-19 Madeline Navarro , Yuhao Wang , Antonio G. Marques , Caroline Uhler , Santiago Segarra

It is confirmed in this work that the graph isomorphism can be tested in polynomial time, which resolves a longstanding problem in the theory of computation. The contributions are in three phases as follows. 1. A description graph…

Computational Complexity · Computer Science 2023-01-25 Rui Xue

Graph neural networks (GNNs) have demonstrated excellent performance in semi-supervised node classification tasks. Despite this, two primary challenges persist: heterogeneity and heterophily. Each of these two challenges can significantly…

Machine Learning · Computer Science 2025-04-14 Kangkang Lu , Yanhua Yu , Zhiyong Huang , Yunshan Ma , Xiao Wang , Meiyu Liang , Yuling Wang , Yimeng Ren , Tat-Seng Chua

Proposing an effective and flexible matrix to represent a graph is a fundamental challenge that has been explored from multiple perspectives, e.g., filtering in Graph Fourier Transforms. In this work, we develop a novel and general…

Machine Learning · Computer Science 2023-05-11 Mingqi Yang , Wenjie Feng , Yanming Shen , Bryan Hooi
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