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Understanding patients' journeys in healthcare system is a fundamental prepositive task for a broad range of AI-based healthcare applications. This task aims to learn an informative representation that can comprehensively encode hidden…

Machine Learning · Computer Science 2020-06-22 Xueping Peng , Guodong Long , Tao Shen , Sen Wang , Jing Jiang

Modeling clinical time-series data is hampered by the challenge of capturing latent, time-varying dependencies among features. State-of-the-art approaches often rely on black-box mechanisms or simple aggregation, failing to explicitly model…

Machine Learning · Computer Science 2026-01-21 Yubo Li , Rema Padman

Motivated by the growing number of mobile devices capable of connecting and exchanging messages, we propose a methodology aiming to model and analyze node mobility in networks. We note that many existing solutions in the literature rely on…

Networking and Internet Architecture · Computer Science 2021-11-12 Matheus F. C. Barros , Carlos H. G. Ferreira , Bruno Pereira dos Santos , Lourenço A. P. Júnior , Marco Mellia , Jussara M. Almeida

Understanding pattern formation in crossing pedestrian flows is essential for analyzing and managing high-density crowd dynamics in urban environments. This study presents two complementary methodological approaches to detect and…

Physics and Society · Physics 2025-04-24 Piotr Nyczka , Pratik Mullick

Trip flow between areas is a fundamental metric for human mobility research. Given its identification with travel demand and its relevance for transportation and urban planning, many models have been developed for its estimation. These…

Physics and Society · Physics 2023-09-06 Erjian Liu , Mattia Mazzoli , Xiao-Yong Yan , Jose J. Ramasco

The structure of road networks plays a pivotal role in shaping transportation dynamics. It also provides insights into how drivers experience city streets and helps uncover each urban environment's unique characteristics and challenges.…

Social and Information Networks · Computer Science 2025-11-11 Anu Kuncheria , Joan L. Walker , Jane Macfarlane

The sensitivity analysis of biological system models can significantly contribute to identifying and explaining influences of internal or external changes on model and its elements. We propose here a comprehensive framework to study…

Molecular Networks · Quantitative Biology 2019-02-11 Gaoxiang Zhou , Kai-Wen Liang , Natasa Miskov-Zivanov

Diseases involve complex processes and modifications to the cellular machinery. The gene expression profile of the affected cells contains characteristic patterns linked to a disease. Hence, biological knowledge pertaining to a disease can…

Quantitative Methods · Quantitative Biology 2020-04-13 Thomas Gaudelet , Noel Malod-Dognin , Jon Sanchez-Valle , Vera Pancaldi , Alfonso Valencia , Natasa Przulj

Parkinson's disease (PD) is a common neurodegenerative disease with a high degree of heterogeneity in its clinical features, rate of progression, and change of variables over time. In this work, we present a novel data-driven, network-based…

Applications · Statistics 2020-07-01 Sanjukta Krishnagopal , Rainer Von Coelln , Lisa M. Shulman , Michelle Girvan

Complex survey designs are commonly employed in many medical cohorts. In such scenarios, developing case-specific predictive risk score models that reflect the unique characteristics of the study design is essential for minimizing selective…

Methodology · Statistics 2025-03-27 Marcos Matabuena , Juan C. Vidal , Rahul Ghosal , Jukka-Pekka Onnela

Time series analysis has proven to be a powerful method to characterize several phenomena in biology, neuroscience and economics, and to understand some of their underlying dynamical features. Despite a plethora of methods have been…

Physics and Society · Physics 2023-03-01 Andrea Santoro , Federico Battiston , Giovanni Petri , Enrico Amico

Comparative graph and network analysis play an important role in both systems biology and pattern recognition, but existing surveys on the topic have historically ignored or underserved one or the other of these fields. We present an…

Social and Information Networks · Computer Science 2019-05-17 Emily Evans , Marissa Graham

Appropriate modeling of a surveillance scene is essential for detection of anomalies in road traffic. Learning usual paths can provide valuable insight into road traffic conditions and thus can help in identifying unusual routes taken by…

Computer Vision and Pattern Recognition · Computer Science 2019-06-18 Santhosh Kelathodi Kumaran , Debi Prosad Dogra , Partha Pratim Roy , Bidyut Baran Chaudhuri

Observational data in medicine arise as a result of the complex interaction between patients and the healthcare system. The sampling process is often highly irregular and itself constitutes an informative process. When using such data to…

Machine Learning · Computer Science 2022-05-27 Vincent Jeanselme , Glen Martin , Niels Peek , Matthew Sperrin , Brian Tom , Jessica Barrett

Networks are used as highly expressive tools in different disciplines. In recent years, the analysis and mining of temporal networks have attracted substantial attention. Frequent pattern mining is considered an essential task in the…

Social and Information Networks · Computer Science 2021-05-14 Ali Jazayeri , Christopher C. Yang

Existing methods for anomaly detection often fall short due to their inability to handle the complexity, heterogeneity, and high dimensionality inherent in real-world mobility data. In this paper, we propose DeepBayesic, a novel framework…

Machine Learning · Computer Science 2024-10-07 Minxuan Duan , Yinlong Qian , Lingyi Zhao , Zihao Zhou , Zeeshan Rasheed , Rose Yu , Khurram Shafique

Recently, there is a surge of interests on heterogeneous information network analysis. As a newly emerging network model, heterogeneous information networks have many unique features (e.g., complex structure and rich semantics) and a number…

Information Retrieval · Computer Science 2014-03-31 Yitong Li , Chuan Shi , Philip S. Yu , Qing Chen

Progress in a research field can be hard to assess, in particular when many concurrent methods are proposed in a short period of time. This is the case in digital pathology, where many foundation models have been released recently to serve…

Computer Vision and Pattern Recognition · Computer Science 2026-02-18 Pierre Marza , Leo Fillioux , Sofiène Boutaj , Kunal Mahatha , Christian Desrosiers , Pablo Piantanida , Jose Dolz , Stergios Christodoulidis , Maria Vakalopoulou

Clustering time-series data in healthcare is crucial for clinical phenotyping to understand patients' disease progression patterns and to design treatment guidelines tailored to homogeneous patient subgroups. While rich temporal dynamics…

Machine Learning · Computer Science 2023-02-27 Yuchao Qin , Mihaela van der Schaar , Changhee Lee

The fast-growing amount of traffic data brings many opportunities for revealing more insightful information about traffic dynamics. However, it also demands an effective database management system in which information retrieval is arguably…

Computer Vision and Pattern Recognition · Computer Science 2023-11-30 Tin T. Nguyen , Simeon C. Calvert , Guopeng Li , Hans van Lint
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