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We propose a linear algebraic framework for performing density estimation. It consists of three simple steps: convolving the empirical distribution with certain smoothing kernels to remove the exponentially large variance; compressing the…

Numerical Analysis · Mathematics 2025-10-29 Yifan Peng , Siyao Yang , Yuehaw Khoo , Daren Wang

We present a rotation-equivariant unsupervised learning framework for the sparse deconvolution of non-negative scalar fields defined on the unit sphere. Spherical signals with multiple peaks naturally arise in Diffusion MRI (dMRI), where…

Image and Video Processing · Electrical Eng. & Systems 2021-02-19 Axel Elaldi , Neel Dey , Heejong Kim , Guido Gerig

We propose a new method for multivariate response regression and covariance estimation when elements of the response vector are of mixed types, for example some continuous and some discrete. Our method is based on a model which assumes the…

Methodology · Statistics 2022-03-04 Karl Oskar Ekvall , Aaron J. Molstad

We consider the problem of robust deconvolution, and particularly the recovery of an unknown deterministic signal convolved with a known filter and corrupted by additive noise. We present a novel, non-iterative data-driven approach.…

Signal Processing · Electrical Eng. & Systems 2021-11-04 Amir Weiss , Boaz Nadler

Microscopy imaging is vital in biology research and diagnosis. When imaging at the scale of cell or molecule level, mechanical drift on the axial axis can be difficult to correct. Although multi-scale networks have been developed for…

Image and Video Processing · Electrical Eng. & Systems 2023-05-31 Jiahe Wang , Boran Han

Motivation: How do we integratively analyze large-scale multi-platform genomic data that are high dimensional and sparse? Furthermore, how can we incorporate prior knowledge, such as the association between genes, in the analysis…

Machine Learning · Computer Science 2017-11-28 Dongjin Choi , Lee Sael

Life science is entering a new era of petabyte-level sequencing data. Converting such big data to biological insights represents a huge challenge for computational analysis. To this end, we developed DeepMetabolism, a biology-guided deep…

Genomics · Quantitative Biology 2017-05-10 Weihua Guo , You Xu , Xueyang Feng

The functional and structural representation of the brain as a complex network is marked by the fact that the comparison of noisy and intrinsically correlated high-dimensional structures between experimental conditions or groups shuns…

Neurons and Cognition · Quantitative Biology 2013-10-25 Tommaso Furlanello , Marco Cristoforetti , Cesare Furlanello , Giuseppe Jurman

To investigate the processing of speech in the brain, simple linear models are commonly used to establish a relationship between brain signals and speech features. However, these linear models are ill-equipped to model a highly dynamic and…

Signal Processing · Electrical Eng. & Systems 2024-09-24 Xiran Xu , Bo Wang , Yujie Yan , Haolin Zhu , Zechen Zhang , Xihong Wu , Jing Chen

Compositional data, where only relative abundances are available, are common in microbiome and other high-throughput sequencing studies. Log ratios between groups of variables serve as key biomarkers in these settings. However, selecting…

Methodology · Statistics 2025-04-02 Jing Ma , Paizhe Xie , Kristyn Pantoja , David E. Jones

Modern scientific studies often collect data sets in the forms of tensors, which call for innovative statistical analysis methods. In particular, there is a pressing need for tensor clustering methods to understand the heterogeneity in the…

Methodology · Statistics 2021-04-27 Qing Mai , Xin Zhang , Yuqing Pan , Kai Deng

Identifying high-quality and easily accessible annotated samples poses a notable challenge in medical image analysis. Transfer learning techniques, leveraging pre-training data, offer a flexible solution to this issue. However, the impact…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Asmaa Abbas , Mohamed Gaber , Mohammed M. Abdelsamea

Wideband analog signals push contemporary analog-to-digital conversion systems to their performance limits. In many applications, however, sampling at the Nyquist rate is inefficient because the signals of interest contain only a small…

Information Theory · Computer Science 2016-11-15 Joel A. Tropp , Jason N. Laska , Marco F. Duarte , Justin K. Romberg , Richard G. Baraniuk

Inferring concerted changes among biological traits along an evolutionary history remains an important yet challenging problem. Besides adjusting for spurious correlation induced from the shared history, the task also requires sufficient…

We consider the problem of multivariate density deconvolution when the interest lies in estimating the distribution of a vector-valued random variable but precise measurements of the variable of interest are not available, observations…

Methodology · Statistics 2016-12-06 Abhra Sarkar , Debdeep Pati , Bani K. Mallick , Raymond J. Carroll

This paper presents a novel stochastic optimisation methodology to perform empirical Bayesian inference in semi-blind image deconvolution problems. Given a blurred image and a parametric class of possible operators, the proposed…

Applications · Statistics 2024-03-12 Charlesquin Kemajou Mbakam , Marcelo Pereyra , Jean-François Giovannelli

Key-value~(KV) caching is an important technique to accelerate the inference of large language models~(LLMs), but incurs significant memory overhead. To compress the size of KV cache, existing methods often compromise precision or require…

Computation and Language · Computer Science 2024-05-22 Peiyu Liu , Ze-Feng Gao , Wayne Xin Zhao , Yipeng Ma , Tao Wang , Ji-Rong Wen

A common goal in observational research is to estimate marginal causal effects in the presence of confounding variables. One solution to this problem is to use the covariate distribution to weight the outcomes such that the data appear…

Methodology · Statistics 2020-08-18 Kevin P. Josey , Elizabeth Juarez-Colunga , Fan Yang , Debashis Ghosh

Estimating probabilistic deformable template models is a new approach in the fields of computer vision and probabilistic atlases in computational anatomy. A first coherent statistical framework modelling the variability as a hidden random…

Computation · Statistics 2009-01-16 Stéphanie Allassonnière , Estelle Kuhn

We consider a continuous-time stochastic volatility model. The model contains a stationary volatility process, the multivariate density of the finite dimensional distributions of which we aim to estimate. We assume that we observe the…

Statistics Theory · Mathematics 2014-07-08 Bert van Es , Peter Spreij