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Teachers often conduct surveys in order to collect data from a predefined group of students to gain insights into topics of interest. When analyzing surveys with open-ended textual responses, it is extremely time-consuming, labor-intensive,…

Machine Learning · Computer Science 2022-10-11 Soheil Esmaeilzadeh , Brian Williams , Davood Shamsi , Onar Vikingstad

The increasingly collaborative, globalized nature of scientific research combined with the need to share data and the explosion in data volumes present an urgent need for a scientific data management system (SDMS). An SDMS presents a…

Databases · Computer Science 2020-04-09 Dale Stansberry , Suhas Somnath , Jessica Breet , Gregory Shutt , Mallikarjun Shankar

Recordings of whole brain activity with single neuron resolution are now feasible in simple organisms. Yet, it is still challenging to appropriately simplify such complex, noisy, and multivariate data in order to reveal general principles…

Neurons and Cognition · Quantitative Biology 2017-11-27 Connor Brennan , Alex Proekt

The characterisation of biomarkers and endophenotypic measures has been a central goal of research in psychiatry over the last years. While most of this research has focused on the identification of biomarkers and endophenotypes, using…

Neurons and Cognition · Quantitative Biology 2017-12-19 Christoph Metzner , Tuomo Mäki-Marttunen , Bartosz Zurowski , Volker Steuber

WOD-2012 aims at facilitating new trends and ideas from a broad range of topics concerned within the widely-spread Open Data movement, from the viewpoint of computer science research. While being most commonly known from the recent Linked…

Digital Libraries · Computer Science 2012-05-22 Guillaume Raschia , Martin Theobald , Ioana Manolescu

Seeing is believing, however, the underlying mechanism of how human visual perceptions are intertwined with our cognitions is still a mystery. Thanks to the recent advances in both neuroscience and artificial intelligence, we have been able…

Image and Video Processing · Electrical Eng. & Systems 2023-08-17 Yu-Ting Lan , Kan Ren , Yansen Wang , Wei-Long Zheng , Dongsheng Li , Bao-Liang Lu , Lili Qiu

In modern data-driven science, reproducibility and reusability are key challenges. Scientists are well skilled in the process from data to publication. Although some publication channels require source code and data to be made accessible,…

Artificial Intelligence · Computer Science 2023-07-14 Romeo Kienzler , Rafflesia Khan , Jerome Nilmeier , Ivan Nesic , Ibrahim Haddad

Detecting dynamic patterns of task-specific responses shared across heterogeneous datasets is an essential and challenging problem in many scientific applications in medical science and neuroscience. In our motivating example of rodent…

Neurons and Cognition · Quantitative Biology 2024-07-02 Yubai Yuan , Babak Shahbaba , Norbert Fortin , Keiland Cooper , Qing Nie , Annie Qu

In the search for a sustainable approach for software ecosystems that supports experimental and observational science (EOS) across Oak Ridge National Laboratory (ORNL), we conducted a survey to understand the current and future landscape of…

Software Engineering · Computer Science 2022-09-07 David E Bernholdt , Mathieu Doucet , William F Godoy , Addi Malviya-Thakur , Gregory R Watson

Network data mining has become an important area of study due to the large number of problems it can be applied to. This paper presents NOESIS, an open source framework for network data mining that provides a large collection of network…

Social and Information Networks · Computer Science 2017-06-26 Víctor Martínez , Fernando Berzal , Juan-Carlos Cubero

We present a shared data model for enabling data science in Massive Open Online Courses (MOOCs). The model captures students interactions with the online platform. The data model is platform agnostic and is based on some basic core actions…

Information Retrieval · Computer Science 2014-06-10 Kalyan Veeramachaneni , Sherif Halawa , Franck Dernoncourt , Una-May O'Reilly , Colin Taylor , Chuong Do

Cognitive diagnosis is a crucial task in computational education, aimed at evaluating students' proficiency levels across various knowledge concepts through exercises. Current models, however, primarily rely on students' answered exercises,…

Computers and Society · Computer Science 2023-12-19 Haiping Ma , Changqian Wang , Hengshu Zhu , Shangshang Yang , Xiaoming Zhang , Xingyi Zhang

Novel contexts may often arise in complex querying scenarios such as in evidence-based medicine (EBM) involving biomedical literature, that may not explicitly refer to entities or canonical concept forms occurring in any fact- or rule-based…

Computation and Language · Computer Science 2019-11-12 Manirupa Das , Juanxi Li , Eric Fosler-Lussier , Simon Lin , Soheil Moosavinasab , Steve Rust , Yungui Huang , Rajiv Ramnath

A new benchmark dataset for functional data analysis (FDA) is presented, focusing on the reconstruction of eye movements from EEG data. The contribution is twofold: first, open challenges and evaluation metrics tailored to FDA applications…

Signal Processing · Electrical Eng. & Systems 2025-04-08 Tiago Vasconcelos Afonso , Florian Heinrichs

Scientific research is highly structured and some of that structure is reflected in research reports. Traditional scientific research reports are yielding to interactive documents which expose their internal structure and are richly linked…

Digital Libraries · Computer Science 2012-09-04 Robert B. Allen

Modern scientific fields face the challenge of integrating a wealth of data, analyses, and results. We recently showed that a neglect of this integration can lead to circular analyses and redundant explanations. Here, we help advance…

Neurons and Cognition · Quantitative Biology 2025-08-15 Mika Rubinov

Recent developments in data management and imaging technologies have significantly affected diagnostic and extrapolative research in the understanding of neurodegenerative diseases. However, the impact of these new technologies is largely…

Many research groups aspire to make data and code FAIR and reproducible, yet struggle because the data and code life cycles are disconnected, executable environments are often missing from published work, and technical skill requirements…

We propose the new cloud-based service OpenResearch for managing and analyzing data about scientific events such as conferences and workshops in a persistent and reliable way. This includes data about scientific articles, participants,…

Digital Libraries · Computer Science 2017-11-29 Andreas Behrend , Sahar Vahdati , Christoph Lange , Christiane Engels

The reuse of research software is central to research efficiency and academic exchange. The application of software enables researchers with varied backgrounds to reproduce, validate, and expand upon study findings. Furthermore, the…