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In recent years, the field of electroencephalography (EEG) analysis has witnessed remarkable advancements, driven by the integration of machine learning and artificial intelligence. This survey aims to encapsulate the latest developments,…

Signal Processing · Electrical Eng. & Systems 2025-01-09 Pengfei Wang , Huanran Zheng , Silong Dai , Yiqiao Wang , Xiaotian Gu , Yuanbin Wu , Xiaoling Wang

Brain imaging analysis is fundamental in neuroscience, providing valuable insights into brain structure and function. Traditional workflows follow a sequential pipeline-brain extraction, registration, segmentation, parcellation, network…

Image and Video Processing · Electrical Eng. & Systems 2025-02-27 Yao Su , Keqi Han , Mingjie Zeng , Lichao Sun , Liang Zhan , Carl Yang , Lifang He , Xiangnan Kong

Dynamic brain data, teeming with biological and functional insights, are becoming increasingly accessible through advanced measurements, providing a gateway to understanding the inner workings of the brain in living subjects. However, the…

Neurons and Cognition · Quantitative Biology 2025-08-19 Zixia Zhou , Junyan Liu , Wei Emma Wu , Ruogu Fang , Sheng Liu , Qingyue Wei , Rui Yan , Yi Guo , Qian Tao , Yuanyuan Wang , Md Tauhidul Islam , Lei Xing

Research in life sciences is increasingly being conducted in a digital and online environment. In particular, life scientists have been pioneers in embracing new computational tools to conduct their investigations. To support the sharing of…

Currently, there is no universal method to track who shared what, with whom, when and for what purposes in a verifiable way to create an individual incentive for data owners. A platform that allows data owners to control, delete, and get…

Cryptography and Security · Computer Science 2025-10-29 Ajay Kumar Shrestha , Julita Vassileva

Unobserved confounding is common in many applications, making causal inference from observational data challenging. As a remedy, causal sensitivity analysis is an important tool to draw causal conclusions under unobserved confounding with…

Machine Learning · Computer Science 2024-04-10 Dennis Frauen , Fergus Imrie , Alicia Curth , Valentyn Melnychuk , Stefan Feuerriegel , Mihaela van der Schaar

The exponential growth of neuroscientific data necessitates platforms that facilitate data management and multidisciplinary collaboration. In this paper, we introduce Pennsieve - an open-source, cloud-based scientific data management…

Computers and Society · Computer Science 2024-09-24 Zack Goldblum , Zhongchuan Xu , Haoer Shi , Patryk Orzechowski , Jamaal Spence , Kathryn A Davis , Brian Litt , Nishant Sinha , Joost Wagenaar

Human brain achieves dynamic stability-plasticity balance through synaptic homeostasis. Inspired by this biological principle, we propose SPICED: a neuromorphic framework that integrates the synaptic homeostasis mechanism for unsupervised…

Artificial Intelligence · Computer Science 2025-09-23 Yangxuan Zhou , Sha Zhao , Jiquan Wang , Haiteng Jiang , Shijian Li , Tao Li , Gang Pan

Mainstream knowledge management researchers generally agree that knowledge extracted from unstructured data and semi-structured data have become imperative for organizational strategic decision making. In this research, we develop a…

Information Retrieval · Computer Science 2020-07-15 Gerald Onwujekwe , Kweku-Muata Osei-Bryson , Nnatubemugo Ngwum

Electroencephalography (EEG) foundation models hold significant promise for universal Brain-Computer Interfaces (BCIs). However, existing approaches often rely on end-to-end fine-tuning and exhibit limited efficacy under frozen-probing…

Machine Learning · Computer Science 2026-03-20 Jiquan Wang , Sha Zhao , Yangxuan Zhou , Yiming Kang , Shijian Li , Gang Pan

Contextual information is widely considered for NLP and knowledge discovery in life sciences since it highly influences the exact meaning of natural language. The scientific challenge is not only to extract such context data, but also to…

Databases · Computer Science 2020-01-24 Jens Dörpinghaus , Andreas Stefan , Bruce Schultz , Marc Jacobs

Many, if not most, systems of interest in science are naturally described as nonlinear dynamical systems. Empirically, we commonly access these systems through time series measurements. Often such time series may consist of discrete random…

Machine Learning · Computer Science 2024-06-10 Manuel Brenner , Florian Hess , Georgia Koppe , Daniel Durstewitz

Systems neuroscience relies on two complementary views of neural data, characterized by single neuron tuning curves and analysis of population activity. These two perspectives combine elegantly in neural latent variable models that…

Humans and most animals inherently possess a distinctive capacity to continually acquire novel experiences and accumulate worldly knowledge over time. This ability, termed continual learning, is also critical for deep neural networks (DNNs)…

Machine Learning · Computer Science 2025-04-22 Geng Liu , Fei Zhu , Rong Feng , Zhiqiang Yi , Shiqi Wang , Gaofeng Meng , Zhaoxiang Zhang

Standardizing terminology to annotate electrophysiological events can improve both computational research and clinical care. Sharing data enriched with standard terms can facilitate data exploration, from case studies to mega-analyses. The…

Big science initiatives are trying to reconstruct and model the brain by attempting to simulate brain tissue at larger scales and with increasingly more biological detail than previously thought possible. The exponential growth of parallel…

Performance · Computer Science 2020-06-25 Francesco Cremonesi , Georg Hager , Gerhard Wellein , Felix Schürmann

Data management, which encompasses activities and strategies related to the storage, organization, and description of data and other research materials, helps ensure the usability of datasets -- both for the original research team and for…

Digital Libraries · Computer Science 2022-04-14 John A. Borghi , Ana E. Van Gulick

Animal brains flexibly and efficiently achieve many behavioral tasks with a single neural network. A core goal in modern neuroscience is to map the mechanisms of the brain's flexibility onto the dynamics underlying neural populations.…

Neurons and Cognition · Quantitative Biology 2026-03-12 Anirudh Jamkhandi , Ali Korojy , Olivier Codol , Guillaume Lajoie , Matthew G. Perich

In recent years, Artificial Intelligence has become a powerful partner for complex tasks such as data analysis, prediction, and problem-solving, yet its lack of transparency raises concerns about its reliability. In sensitive domains such…

Machine Learning · Computer Science 2026-03-10 Jesús Sánchez Ochoa , Enrique Tomás Martínez Beltrán , Alberto Huertas Celdrán

Understanding the interaction patterns among simultaneous recordings of spike trains from multiple neuronal units is a key topic in neuroscience. However, an optimal approach of assessing these interactions has not been established, as…

Neurons and Cognition · Quantitative Biology 2020-12-17 Gorana Mijatovic , Yuri Antonacci , Tatjana Loncar-Turukalo , Ludovico Minati , Luca Faes
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