Related papers: Small error algorithms for tropical group testing
Detection of defective members of large populations has been widely studied in the statistics community under the name "group testing", a problem which dates back to World War II when it was suggested for syphilis screening. There the main…
We consider the problem of non-adaptive group testing of $N$ items out of which $K$ or less items are known to be defective. We propose a testing scheme based on left-and-right-regular sparse-graph codes and a simple iterative decoder. We…
We formulate and analyze a stochastic threshold group testing problem motivated by biological applications. Here a set of $n$ items contains a subset of $d \ll n$ defective items. Subsets (pools) of the $n$ items are tested -- the test…
We formalize a problem we call combinatorial pair testing (CPT), which has applications to the identification of uncooperative or unproductive participants in pair programming, massively distributed computing, and crowdsourcing…
Model reduction is a central topic in systems biology and dynamical systems theory, for reducing the complexity of detailed models, finding important parameters, and developing multi-scale models for instance. While perturbation theory is a…
We study Probabilistic Group Testing of a set of N items each of which is defective with probability p. We focus on the double limit of small defect probability, p<<1, and large number of variables, N>>1, taking either p->0 after…
When the infection prevalence of a disease is low, Dorfman showed 80 years ago that testing groups of people can prove more efficient than testing people individually. Our goal in this paper is to propose new group testing algorithms that…
We analyze a new group testing scheme, termed semi-quantitative group testing, which may be viewed as a concatenation of an adder channel and a discrete quantizer. Our focus is on non-uniform quantizers with arbitrary thresholds. For the…
In this paper, we derive mutual information based upper and lower bounds on the number of nonadaptive group tests required to identify a given number of "non defective" items from a large population containing a small number of "defective"…
The COVID-19 crisis highlighted the importance of non-medical interventions, such as testing and isolation of infected individuals, in the control of epidemics. Here, we show how to minimize testing needs while maintaining the number of…
In probabilistic nonadaptive group testing (PGT), we aim to characterize the number of pooled tests necessary to identify a random $k$-sparse vector of defectives with high probability. Recent work has shown that $n$ tests are necessary…
We study the group testing problem where the goal is to identify a set of k infected individuals carrying a rare disease within a population of size n, based on the outcomes of pooled tests which return positive whenever there is at least…
In combinatorial group testing (CGT), the objective is to identify the set of at most $d$ defective items from a pool of $n$ items using as few tests as possible. The celebrated result for the CGT problem is that the number of tests $t$ can…
A general framework describing the statistical discrimination of an ensemble of quantum channels is given by the name of quantum reading. Several tools can be applied in quantum reading to reduce the error probability in distinguishing the…
Group testing is a long studied problem in combinatorics: A small set of $r$ ill people should be identified out of the whole ($n$ people) by using only queries (tests) of the form "Does set X contain an ill human?". In this paper we…
The group testing problem consists of determining a small set of defective items from a larger set of items based on tests on groups of items, and is relevant in applications such as medical testing, communication protocols, pattern…
We derive an information-theoretic lower bound for sample complexity in sparse recovery problems where inputs can be chosen sequentially and adaptively. This lower bound is in terms of a simple mutual information expression and unifies many…
Let $1 \le s < t$, $N \ge 1$ be integers and a complex electronic circuit of size $t$ is said to be an $s$-active, $\; s \ll t$, and can work as a system block if not more than $s$ elements of the circuit are defective. Otherwise, the…
The first part of the paper presents a review of the gold-standard testing protocol for Covid-19, real-time, reverse transcriptase PCR, and its properties and associated measurement data such as amplification curves that can guide the…
In this paper, we propose algorithms that leverage a known community structure to make group testing more efficient. We consider a population organized in disjoint communities: each individual participates in a community, and its infection…