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Purpose: To implement a brain segmentation pipeline based on convolutional neural networks, which rapidly segments 3D volumes into 27 anatomical structures. To provide an extensive, comparative study of segmentation performance on various…

Image and Video Processing · Electrical Eng. & Systems 2020-08-12 Jonathan Zopes , Moritz Platscher , Silvio Paganucci , Christian Federau

Background and Purpose: Identifying the thromboembolism source in ischemic stroke is crucial for treatment and secondary prevention yet is often undetermined. This study describes a self-supervised deep learning approach in digital…

Computer Vision and Pattern Recognition · Computer Science 2024-05-03 K. Yeh , M. S. Jabal , V. Gupta , D. F. Kallmes , W. Brinjikji , B. S. Erdal

The evaluation and treatment of acute cerebral ischemia requires a technique that can determine the total area of tissue at risk for infarction using diagnostic magnetic resonance imaging (MRI) sequences. Typical MRI data sets consist of…

Computer Vision and Pattern Recognition · Computer Science 2016-06-14 Vishwa S. Parekh , Jeremy R. Jacobs , Michael A. Jacobs

The rapid development in representation learning techniques such as deep neural networks and the availability of large-scale, well-annotated medical imaging datasets have to a rapid increase in the use of supervised machine learning in the…

Computer Vision and Pattern Recognition · Computer Science 2023-04-19 Dat T. Ngo , Thao T. B. Nguyen , Hieu T. Nguyen , Dung B. Nguyen , Ha Q. Nguyen , Hieu H. Pham

Cardiac left ventricular (LV) segmentation from short-axis MRI acquired 10 minutes after the injection of a contrast agent (LGE-MRI) is a necessary step in the processing allowing the identification and diagnosis of cardiac diseases such as…

Image and Video Processing · Electrical Eng. & Systems 2020-06-02 Abdul Qayyum , Alain Lalande , Thomas Decourselle , Thibaut Pommier , Alexandre Cochet , Fabrice Meriaudeau

Purpose: To evaluate the performance of an automated deep learning method in detecting ascites and subsequently quantifying its volume in patients with liver cirrhosis and ovarian cancer. Materials and Methods: This retrospective study…

Image and Video Processing · Electrical Eng. & Systems 2024-06-25 Benjamin Hou , Sung-Won Lee , Jung-Min Lee , Christopher Koh , Jing Xiao , Perry J. Pickhardt , Ronald M. Summers

Background: Enlargement of perivascular spaces (PVS) is common in neurodegenerative disorders including cerebral small vessel disease, Alzheimer's disease, and Parkinson's disease. PVS enlargement may indicate impaired clearance pathways…

Image and Video Processing · Electrical Eng. & Systems 2025-02-17 William Pham , Alexander Jarema , Donggyu Rim , Zhibin Chen , Mohamed S. H. Khlif , Vaughan G. Macefield , Luke A. Henderson , Amy Brodtmann

Brain tumors are the most common solid tumors and the leading cause of cancer-related death among children. Tumor segmentation is essential in surgical and treatment planning, and response assessment and monitoring. However, manual…

The morbidity of brain stroke increased rapidly in the past few years. To help specialists in lesion measurements and treatment planning, automatic segmentation methods are critically required for clinical practices. Recently, approaches…

Image and Video Processing · Electrical Eng. & Systems 2020-01-01 Kehan Qi , Hao Yang , Cheng Li , Zaiyi Liu , Meiyun Wang , Qiegen Liu , Shanshan Wang

The task of automatically segmenting 3-D surfaces representing boundaries of objects is important for quantitative analysis of volumetric images, and plays a vital role in biomedical image analysis. Recently, graph-based methods with a…

Computer Vision and Pattern Recognition · Computer Science 2018-01-10 Abhay Shah , Michael Abramoff , Xiaodong Wu

This paper presents an automatic algorithm for the segmentation of areas affected by an acute stroke on the non-contrast computed tomography brain images. The proposed algorithm is designed for learning in a weakly supervised scenario when…

Image and Video Processing · Electrical Eng. & Systems 2021-12-22 Anna Dobshik , Andrey Tulupov , Vladimir Berikov

Perfusion imaging is the current gold standard for acute ischemic stroke analysis. It allows quantification of the salvageable and non-salvageable tissue regions (penumbra and core areas respectively). In clinical settings, the singular…

Image and Video Processing · Electrical Eng. & Systems 2021-04-01 Ezequiel de la Rosa , David Robben , Diana M. Sima , Jan S. Kirschke , Bjoern Menze

While total intracranial carotid artery calcification (ICAC) volume is an established stroke biomarker, growing evidence shows this aggregate metric ignores the critical influence of plaque location, since calcification in different…

Image and Video Processing · Electrical Eng. & Systems 2025-10-07 Xiangjian Hou , Ebru Yaman Akcicek , Xin Wang , Kazem Hashemizadeh , Scott Mcnally , Chun Yuan , Xiaodong Ma

A major challenge in stroke research and stroke recovery predictions is the determination of a stroke lesion's extent and its impact on relevant brain systems. Manual segmentation of stroke lesions from 3D magnetic resonance (MR) imaging…

Image and Video Processing · Electrical Eng. & Systems 2023-06-21 Sovesh Mohapatra , Advait Gosai , Anant Shinde , Aleksei Rutkovskii , Sirisha Nouduri , Gottfried Schlaug

The performance of deep learning (DL) methods for the analysis of cine cardiovascular magnetic resonance (CMR) is typically assessed in terms of accuracy, overlooking precision. In this work, uncertainty estimation techniques, namely deep…

Computer Vision and Pattern Recognition · Computer Science 2026-03-31 Dewmini Hasara Wickremasinghe , Michelle Gibogwe , Andrew Bell , Esther Puyol-Antón , Muhummad Sohaib Nazir , Reza Razavi , Bruno Paun , Paul Aljabar , Andrew P. King

The state-of-the-art deep learning methods have demonstrated impressive performance in segmentation tasks. However, the success of these methods depends on a large amount of manually labeled masks, which are expensive and time-consuming to…

Image and Video Processing · Electrical Eng. & Systems 2021-12-06 Shuqiang Wang , Zhuo Chen , Wen Yu , Baiying Lei

Classifying fine-grained ischemic stroke phenotypes relies on identifying important clinical information. Radiology reports provide relevant information with context to determine such phenotype information. We focus on stroke phenotypes…

Computation and Language · Computer Science 2020-10-13 Surabhi Datta , Shekhar Khanpara , Roy F. Riascos , Kirk Roberts

We introduce the CPAISD: Core-Penumbra Acute Ischemic Stroke Dataset, aimed at enhancing the early detection and segmentation of ischemic stroke using Non-Contrast Computed Tomography (NCCT) scans. Addressing the challenges in diagnosing…

Image and Video Processing · Electrical Eng. & Systems 2024-04-04 D. Umerenkov , S. Kudin , M. Peksheva , D. Pavlov

Deep learning techniques have revolutionized the field of machine learning and were recently successfully applied to various classification problems in noninvasive electroencephalography (EEG). However, these methods were so far only rarely…

Automatic segmentation of myocardial contours and relevant areas like infraction and no-reflow is an important step for the quantitative evaluation of myocardial infarction. In this work, we propose a cascaded convolutional neural network…

Image and Video Processing · Electrical Eng. & Systems 2020-12-29 Yichi Zhang