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-Molecular simulations allow the study of properties and interactions of molecular systems. This article presents an improved version of the Adaptive Resolution Scheme that links two systems having atomistic (also called fine-grained) and…

Computational Engineering, Finance, and Science · Computer Science 2017-08-01 Iuliana Marin , Virgil Tudose , Anton Hadar , Nicolae Goga , Andrei Doncescu

Recent research has shown that large language models pretrained using unsupervised approaches can achieve significant performance improvement on many downstream tasks. Typically when adapting these language models to downstream tasks, like…

Computation and Language · Computer Science 2022-06-08 Xiaodi Sun , Sunny Rajagopalan , Priyanka Nigam , Weiyi Lu , Yi Xu , Belinda Zeng , Trishul Chilimbi

Considering deep neural networks as manifold mappers, the pretrain-then-fine-tune paradigm can be interpreted as a two-stage process: pretrain establishes a broad knowledge base, and fine-tune adjusts the model parameters to activate…

Vision-language models have recently shown great potential on many tasks in computer vision. Meanwhile, prior work demonstrates prompt tuning designed for vision-language models could acquire superior performance on few-shot image…

Computer Vision and Pattern Recognition · Computer Science 2025-04-15 Kun Ding , Ying Wang , Pengzhang Liu , Qiang Yu , Haojian Zhang , Shiming Xiang , Chunhong Pan

We present Diffusion Model Patching (DMP), a simple method to boost the performance of pre-trained diffusion models that have already reached convergence, with a negligible increase in parameters. DMP inserts a small, learnable set of…

Computer Vision and Pattern Recognition · Computer Science 2024-12-12 Seokil Ham , Sangmin Woo , Jin-Young Kim , Hyojun Go , Byeongjun Park , Changick Kim

Dynamic bonding is an essential feature of many soft materials. Molecular simulations have proven to be a powerful tool for modeling bonding kinetics and thermodynamics in these materials, providing insights into their properties that…

Soft Condensed Matter · Physics 2026-05-26 Tyla R. Holoman , B. P. Prajwal , Glen M. Hocky , Thomas M. Truskett

Prompting language models (LMs) with training examples and task descriptions has been seen as critical to recent successes in few-shot learning. In this work, we show that finetuning LMs in the few-shot setting can considerably reduce the…

Computation and Language · Computer Science 2021-07-02 Robert L. Logan , Ivana Balažević , Eric Wallace , Fabio Petroni , Sameer Singh , Sebastian Riedel

Learning models of artificial intelligence can nowadays perform very well on a large variety of tasks. However, in practice different task environments are best handled by different learning models, rather than a single, universal,…

Artificial Intelligence · Computer Science 2016-05-31 Adi Makmal , Alexey A. Melnikov , Vedran Dunjko , Hans J. Briegel

The softmax function is a fundamental component in deep learning. This study delves into the often-overlooked parameter within the softmax function, known as "temperature," providing novel insights into the practical and theoretical aspects…

Machine Learning · Computer Science 2025-03-03 Hao Xuan , Bokai Yang , Xingyu Li

Federated learning has emerged as a promising approach for training machine learning models on decentralized data sources while preserving data privacy. However, challenges such as communication bottlenecks, heterogeneity of client devices,…

Machine Learning · Computer Science 2023-12-27 Anna Vettoruzzo , Mohamed-Rafik Bouguelia , Thorsteinn Rögnvaldsson

Deep learning offers transformative potential in medical imaging, yet its clinical adoption is frequently hampered by challenges such as data scarcity, distribution shifts, and the need for robust task generalization. Prompt-based…

Image and Video Processing · Electrical Eng. & Systems 2025-07-03 Hao Yang , Xinlong Liang , Zhang Li , Yue Sun , Zheyu Hu , Xinghe Xie , Behdad Dashtbozorg , Jincheng Huang , Shiwei Zhu , Luyi Han , Jiong Zhang , Shanshan Wang , Ritse Mann , Qifeng Yu , Tao Tan

We propose a soft gradient boosting framework for sequential regression that embeds a learnable linear feature transform within the boosting procedure. At each boosting iteration, we train a soft decision tree and learn a linear input…

Machine Learning · Computer Science 2025-09-17 Huseyin Karaca , Suleyman Serdar Kozat

Instruction fine-tuning has recently emerged as a promising approach for improving the zero-shot capabilities of Large Language Models (LLMs) on new tasks. This technique has shown particular strength in improving the performance of…

Computation and Language · Computer Science 2023-07-13 Jiuding Sun , Chantal Shaib , Byron C. Wallace

Simulations are vital for understanding and predicting the evolution of complex molecular systems. However, despite advances in algorithms and special purpose hardware, accessing the timescales necessary to capture the structural evolution…

Computational Physics · Physics 2021-02-18 Pantelis R. Vlachas , Julija Zavadlav , Matej Praprotnik , Petros Koumoutsakos

This work introduces a new multi-task, parameter-efficient language model (LM) tuning method that learns to transfer knowledge across different tasks via a mixture of soft prompts-small prefix embedding vectors pre-trained for different…

Computation and Language · Computer Science 2022-12-02 Akari Asai , Mohammadreza Salehi , Matthew E. Peters , Hannaneh Hajishirzi

Machine learning (ML) has emerged as a pervasive tool in science, engineering, and beyond. Its success has also led to several synergies with molecular dynamics (MD) simulations, which we use to identify and characterize the major…

Biomolecules · Quantitative Biology 2022-05-09 Christopher Kolloff , Simon Olsson

We present a method for enhanced sampling of molecular dynamics simulations using stochastic resetting. Various phenomena, ranging from crystal nucleation to protein folding, occur on timescales that are unreachable in standard simulations.…

Chemical Physics · Physics 2023-02-09 Ofir Blumer , Shlomi Reuveni , Barak Hirshberg

Learning skills by imitation is a promising concept for the intuitive teaching of robots. A common way to learn such skills is to learn a parametric model by maximizing the likelihood given the demonstrations. Yet, human demonstrations are…

Machine Learning · Computer Science 2023-07-18 Maximilian Xiling Li , Onur Celik , Philipp Becker , Denis Blessing , Rudolf Lioutikov , Gerhard Neumann

Molecular dynamics simulation is now a widespread approach for understanding complex systems on the atomistic scale. It finds applications from physics and chemistry to engineering, life and medical science. In the last decade, the approach…

Computational Physics · Physics 2021-04-28 Shunzhou Wan , Robert C. Sinclair , Peter V. Coveney

Molecular dynamics (MD) is a powerful approach for modelling molecular systems, but it remains computationally intensive on spatial and time scales of many macromolecular systems of biological interest. To explore the opportunities offered…

Biomolecules · Quantitative Biology 2025-08-07 Mhd Hussein Murtada , Z. Faidon Brotzakis , Michele Vendruscolo