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Graphlets are induced subgraph patterns and have been frequently applied to characterize the local topology structures of graphs across various domains, e.g., online social networks (OSNs) and biological networks. Discovering and computing…

Social and Information Networks · Computer Science 2016-10-19 Xiaowei Chen , Yongkun Li , Pinghui Wang , John C. S. Lui

Gradient pattern analysis (GPA) is a well-established technique for measuring gradient bilateral asymmetries of a square numerical lattice. This paper introduces an improved version of GPA designed for galaxy morphometry. We show the…

A wide range of models have been proposed for Graph Generative Models, necessitating effective methods to evaluate their quality. So far, most techniques use either traditional metrics based on subgraph counting, or the representations of…

Machine Learning · Statistics 2022-06-14 Hamed Shirzad , Kaveh Hassani , Danica J. Sutherland

We define a distance metric between partitions of a graph using machinery from optimal transport. Our metric is built from a linear assignment problem that matches partition components, with assignment cost proportional to transport…

Optimization and Control · Mathematics 2019-10-23 Tara Abrishami , Nestor Guillen , Parker Rule , Zachary Schutzman , Justin Solomon , Thomas Weighill , Si Wu

Understanding generalization and robustness of machine learning models fundamentally relies on assuming an appropriate metric on the data space. Identifying such a metric is particularly challenging for non-Euclidean data such as graphs.…

Machine Learning · Computer Science 2022-10-06 Ching-Yao Chuang , Stefanie Jegelka

In modern applications of graphs algorithms, where the graphs of interest are large and dynamic, it is unrealistic to assume that an input representation contains the full information of a graph being studied. Hence, it is desirable to use…

Data Structures and Algorithms · Computer Science 2020-04-14 Nithin Varma , Yuichi Yoshida

How does neural connectivity in autistic children differ from neural connectivity in healthy children or autistic youths? What patterns in global trade networks are shared across classes of goods, and how do these patterns change over time?…

Social and Information Networks · Computer Science 2022-03-11 Corinna Coupette , Sebastian Dalleiger , Jilles Vreeken

Graph neural networks (GNNs) have been popularly used in analyzing graph-structured data, showing promising results in various applications such as node classification, link prediction and network recommendation. In this paper, we present a…

Machine Learning · Computer Science 2021-08-11 Qinkai Zheng , Houyi Li , Peng Zhang , Zhixiong Yang , Guowei Zhang , Xintan Zeng , Yongchao Liu

Graphs drawn in the plane are ubiquitous, arising from data sets through a variety of methods ranging from GIS analysis to image classification to shape analysis. A fundamental problem in this type of data is comparison: given a set of such…

Computational Geometry · Computer Science 2022-10-20 Levent Batakci , Abigail Branson , Bryan Castillo , Candace Todd , Erin Wolf Chambers , Elizabeth Munch

Metric graphs are useful tools for describing spatial domains like road and river networks, where spatial dependence act along the network. We take advantage of recent developments for such Gaussian Random Fields (GRFs), and consider joint…

In this paper, we combine ideas from two different scientific traditions: 1) graph transformation systems (GTSs) stemming from the theory of formal languages and concurrency, and 2) mean field approximations (MFAs), a collection of…

Logic in Computer Science · Computer Science 2020-09-11 Vincent Danos , Tobias Heindel , Ricardo Honorato-Zimmer , Sandro Stucki

In data analysis, there is a strong demand for graph metrics that differ from the classical shortest path and resistance distances. Recently, several new classes of graph metrics have been proposed. This paper presents some of them…

Metric Geometry · Mathematics 2018-11-02 Pavel Chebotarev

Graphs are versatile tools for representing structured data. As a result, a variety of machine learning methods have been studied for graph data analysis. Although many such learning methods depend on the measurement of differences between…

Machine Learning · Statistics 2021-06-18 Tomoki Yoshida , Ichiro Takeuchi , Masayuki Karasuyama

Optimal Transport is a theory that allows to define geometrical notions of distance between probability distributions and to find correspondences, relationships, between sets of points. Many machine learning applications are derived from…

Machine Learning · Statistics 2020-11-10 Titouan Vayer

In this article we consider the graph alignment problem from the perspective of high-dimensional statistics: we aim to estimate an unknown permutation $\pi^*$ from the observation of two correlated random adjacency matrices $A_1$, $A_2$. We…

Probability · Mathematics 2025-10-30 Laurent Massoulié

Recently, graph neural networks (GNNs) have shown prominent performance in semi-supervised node classification by leveraging knowledge from the graph database. However, most existing GNNs follow the homophily assumption, where connected…

Machine Learning · Computer Science 2024-03-12 Henan Sun , Xunkai Li , Zhengyu Wu , Daohan Su , Rong-Hua Li , Guoren Wang

The comparison of graphs is a vitally important, yet difficult task which arises across a number of diverse research areas including biological and social networks. There have been a number of approaches to define graph distance however…

Social and Information Networks · Computer Science 2019-05-29 Andrew Mellor , Angelica Grusovin

Current Graph Neural Networks (GNN) architectures generally rely on two important components: node features embedding through message passing, and aggregation with a specialized form of pooling. The structural (or topological) information…

Machine Learning · Computer Science 2022-06-01 Cédric Vincent-Cuaz , Rémi Flamary , Marco Corneli , Titouan Vayer , Nicolas Courty

In this paper, a new measurement to compare two large-scale graphs based on the theory of quantum probability is proposed. An explicit form for the spectral distribution of the corresponding adjacency matrix of a graph is established. Our…

Discrete Mathematics · Computer Science 2018-07-03 Hayoung Choi , Hosoo Lee , Yifei Shen , Yuanming Shi

Kernel smoothing is a widely used nonparametric method in modern statistical analysis. The problem of efficiently conducting kernel smoothing for a massive dataset on a distributed system is a problem of great importance. In this work, we…

Computation · Statistics 2024-10-08 Yuan Gao , Rui Pan , Feng Li , Riquan Zhang , Hansheng Wang
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