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Cerebral hemodynamics is fundamentally regulated by the Circle of Willis (CoW), which redistributes flow through communicating arteries to stabilize perfusion under anatomical variations and vascular stenosis. In this study, we develop a…

Medical Physics · Physics 2025-12-22 Jiawei Liu , Atsushi Kanoke , Hidenori Endo , Kuniyasu Niizuma , Hiroshi Suito

The Circle of Willis (CoW) is an important network of arteries connecting major circulations of the brain. Its vascular architecture is believed to affect the risk, severity, and clinical outcome of serious neurovascular diseases. However,…

Computer Vision and Pattern Recognition · Computer Science 2025-07-09 Kaiyuan Yang , Fabio Musio , Yihui Ma , Norman Juchler , Johannes C. Paetzold , Rami Al-Maskari , Luciano Höher , Hongwei Bran Li , Ibrahim Ethem Hamamci , Anjany Sekuboyina , Suprosanna Shit , Houjing Huang , Chinmay Prabhakar , Ezequiel de la Rosa , Bastian Wittmann , Diana Waldmannstetter , Florian Kofler , Fernando Navarro , Martin Menten , Ivan Ezhov , Daniel Rueckert , Iris N. Vos , Ynte M. Ruigrok , Birgitta K. Velthuis , Hugo J. Kuijf , Pengcheng Shi , Wei Liu , Ting Ma , Maximilian R. Rokuss , Yannick Kirchhoff , Fabian Isensee , Klaus Maier-Hein , Chengcheng Zhu , Huilin Zhao , Philippe Bijlenga , Julien Hämmerli , Catherine Wurster , Laura Westphal , Jeroen Bisschop , Elisa Colombo , Hakim Baazaoui , Hannah-Lea Handelsmann , Andrew Makmur , James Hallinan , Amrish Soundararajan , Bene Wiestler , Jan S. Kirschke , Roland Wiest , Emmanuel Montagnon , Laurent Letourneau-Guillon , Kwanseok Oh , Dahye Lee , Adam Hilbert , Orhun Utku Aydin , Dimitrios Rallios , Jana Rieger , Satoru Tanioka , Alexander Koch , Dietmar Frey , Abdul Qayyum , Moona Mazher , Steven Niederer , Nico Disch , Julius Holzschuh , Dominic LaBella , Francesco Galati , Daniele Falcetta , Maria A. Zuluaga , Chaolong Lin , Haoran Zhao , Zehan Zhang , Minghui Zhang , Xin You , Hanxiao Zhang , Guang-Zhong Yang , Yun Gu , Sinyoung Ra , Jongyun Hwang , Hyunjin Park , Junqiang Chen , Marek Wodzinski , Henning Müller , Nesrin Mansouri , Florent Autrusseau , Cansu Yalçin , Rachika E. Hamadache , Clara Lisazo , Joaquim Salvi , Adrià Casamitjana , Xavier Lladó , Uma Maria Lal-Trehan Estrada , Valeriia Abramova , Luca Giancardo , Arnau Oliver , Paula Casademunt , Adrian Galdran , Matteo Delucchi , Jialu Liu , Haibin Huang , Yue Cui , Zehang Lin , Yusheng Liu , Shunzhi Zhu , Tatsat R. Patel , Adnan H. Siddiqui , Vincent M. Tutino , Maysam Orouskhani , Huayu Wang , Mahmud Mossa-Basha , Yuki Sato , Sven Hirsch , Susanne Wegener , Bjoern Menze

The Circle of Willis (CoW), vital for ensuring consistent blood flow to the brain, is closely linked to ischemic stroke. Accurate assessment of the CoW is important for identifying individuals at risk and guiding appropriate clinical…

Image and Video Processing · Electrical Eng. & Systems 2025-12-04 Wenxuan Zhang , Shuai Li , Xinyi Wang , Yu Sun , Hongyu Kang , Pui Yuk Chryste Wan , Jing Qin , Yuanpeng Zhang , Yong-Ping Zheng , Sai-Kit Lam

Originating from the diffusion phenomenon in physics that describes particle movement, the diffusion generative models inherit the characteristics of stochastic random walk in the data space along the denoising trajectory. However, the…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Ruoyu Wang , Yongqi Yang , Zhihao Qian , Ye Zhu , Yu Wu

3D spatial graphs play a crucial role in biological and clinical research by modeling anatomical networks such as blood vessels,neurons, and airways. However, generating 3D biological graphs while maintaining anatomical validity remains…

Computer Vision and Pattern Recognition · Computer Science 2025-07-08 Chinmay Prabhakar , Suprosanna Shit , Tamaz Amiranashvili , Hongwei Bran Li , Bjoern Menze

The Circle of Willis (CoW) vessels is critical to connecting major circulations of the brain. The topology of the vascular structure is clinical significance to evaluate the risk, severity of the neuro-vascular diseases. The CoW has two…

Image and Video Processing · Electrical Eng. & Systems 2024-10-22 Minghui Zhang , Xin You , Hanxiao Zhang , Yun Gu

The Circle of Willis (CoW) is a critical network of arteries in the brain, often implicated in cerebrovascular pathologies. Voxel-level segmentation is an important first step toward an automated CoW assessment, but a full quantitative…

Computer Vision and Pattern Recognition · Computer Science 2025-10-16 Fabio Musio , Norman Juchler , Kaiyuan Yang , Suprosanna Shit , Chinmay Prabhakar , Bjoern Menze , Sven Hirsch

This paper presents a novel latent 3D diffusion model for the generation of neural voxel fields, aiming to achieve accurate part-aware structures. Compared to existing methods, there are two key designs to ensure high-quality and accurate…

Computer Vision and Pattern Recognition · Computer Science 2025-05-05 Yuhang Huang , SHilong Zou , Xinwang Liu , Kai Xu

This work introduces a new latent diffusion model to generate high-quality 3D chest CT scans conditioned on 3D anatomical masks. The method synthesizes volumetric images of size 256x256x256 at 1 mm isotropic resolution using a single…

Computer Vision and Pattern Recognition · Computer Science 2025-10-22 Anna Oliveras , Roger Marí , Rafael Redondo , Oriol Guardià , Ana Tost , Bhalaji Nagarajan , Carolina Migliorelli , Vicent Ribas , Petia Radeva

We hereby present a full synthetic model, able to mimic the various constituents of the cerebral vascular tree, including the cerebral arteries, bifurcations and intracranial aneurysms. This model intends to provide a substantial dataset of…

Computer Vision and Pattern Recognition · Computer Science 2024-11-06 Rafic Nader , Florent Autrusseau , Vincent L'Allinec , Romain Bourcier

This study introduces the Conditional Neural Field Latent Diffusion (CoNFiLD) model, a novel generative learning framework designed for rapid simulation of intricate spatiotemporal dynamics in chaotic and turbulent systems within…

Fluid Dynamics · Physics 2024-03-18 Pan Du , Meet Hemant Parikh , Xiantao Fan , Xin-Yang Liu , Jian-Xun Wang

Blood vessel networks, represented as 3D graphs, help predict disease biomarkers, simulate blood flow, and aid in synthetic image generation, relevant in both clinical and pre-clinical settings. However, generating realistic vessel graphs…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Chinmay Prabhakar , Suprosanna Shit , Fabio Musio , Kaiyuan Yang , Tamaz Amiranashvili , Johannes C. Paetzold , Hongwei Bran Li , Bjoern Menze

Despite recent advances in medical image generation, existing methods struggle to produce anatomically plausible 3D structures. In synthetic brain magnetic resonance images (MRIs), characteristic fissures are often missing, and…

Computer Vision and Pattern Recognition · Computer Science 2025-02-19 Fabian Bongratz , Yitong Li , Sama Elbaroudy , Christian Wachinger

Text-conditioned molecular generation aims to translate natural-language descriptions into chemical structures, enabling scientists to specify functional groups, scaffolds, and physicochemical constraints without handcrafted rules.…

Machine Learning · Computer Science 2025-11-18 Lingxiao Li , Haobo Zhang , Bin Chen , Jiayu Zhou

Diffusion models have shown great promise for image generation, beating GANs in terms of generation diversity, with comparable image quality. However, their application to 3D shapes has been limited to point or voxel representations that…

Computer Vision and Pattern Recognition · Computer Science 2022-12-16 Gimin Nam , Mariem Khlifi , Andrew Rodriguez , Alberto Tono , Linqi Zhou , Paul Guerrero

We propose a novel approach for probabilistic generative modeling of 3D shapes. Unlike most existing models that learn to deterministically translate a latent vector to a shape, our model, Point-Voxel Diffusion (PVD), is a unified,…

Computer Vision and Pattern Recognition · Computer Science 2021-08-31 Linqi Zhou , Yilun Du , Jiajun Wu

Diffusion models have demonstrated remarkable success in various domains, including molecular generation. However, conditional molecular generation remains a fundamental challenge due to an intrinsic trade-off between targeting specific…

Machine Learning · Computer Science 2024-11-04 Hojung Jung , Youngrok Park , Laura Schmid , Jaehyeong Jo , Dongkyu Lee , Bongsang Kim , Se-Young Yun , Jinwoo Shin

We propose an image-conditioned diffusion model to estimate high angular resolution diffusion weighted imaging (DWI) from a low angular resolution acquisition. Our model, which we call QID$^2$, takes as input a set of low angular resolution…

Image and Video Processing · Electrical Eng. & Systems 2024-09-05 Zijian Chen , Jueqi Wang , Archana Venkataraman

Synthetic neuroimaging data can mitigate critical limitations of real-world datasets, including the scarcity of rare phenotypes, domain shifts across scanners, and insufficient longitudinal coverage. However, existing generative models…

Computer Vision and Pattern Recognition · Computer Science 2026-01-28 Fabian Bongratz , Yitong Li , Sama Elbaroudy , Christian Wachinger

Although the recent rapid evolution of 3D generative neural networks greatly improves 3D shape generation, it is still not convenient for ordinary users to create 3D shapes and control the local geometry of generated shapes. To address…

Computer Vision and Pattern Recognition · Computer Science 2023-05-10 Xin-Yang Zheng , Hao Pan , Peng-Shuai Wang , Xin Tong , Yang Liu , Heung-Yeung Shum
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