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Related papers: Shape Programming in Entropic Tissues

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We develop a continuum theory to describe the collective dynamics of deformable epithelial cells, using two tensor order parameters to distinguish the force-generating active filaments in the cells from their shape. The theory demonstrates…

Soft Condensed Matter · Physics 2025-01-13 Mehrana R. Nejad , Julia M. Yeomans , Sumesh P Thampi

Epithelial tissues act as barriers and, therefore, must repair themselves, respond to environmental changes and grow without compromising their integrity. Consequently, they exhibit complex viscoelastic rheological behavior where…

Soft Condensed Matter · Physics 2022-10-04 Sijie Tong , Navreeta K. Singh , Rastko Sknepnek , Andrej Kosmrlj

We investigate a class of "shape allophiles" that fit together like puzzle pieces as a method to access and stabilize desired structures by controlling directional entropic forces. Squares are cut into rectangular halves, which are shaped…

Soft Condensed Matter · Physics 2017-09-08 Eric S. Harper , Ryan L. Marson , Joshua A. Anderson , Greg van Anders , Sharon C. Glotzer

Cell neighbor exchanges play a critical role in regulating tissue fluidity during epithelial morphogenesis and repair. In vivo, these neighbor exchanges are often hindered by the formation of transiently stable four-fold vertices, which can…

Biological Physics · Physics 2023-10-17 Fernanda Pérez-Verdugo , Shiladitya Banerjee

Unlike other tissue types, like epithelial tissue, which consist of cells with a much more homogeneous structure and function, the nervous tissue spans in a complex multilayer environment whose topographical features display a large…

Biological Physics · Physics 2017-05-12 C. Simitzi , A. Ranella , E. Stratakis

In this paper we study how to shape temporal pulses to switch a bistable system between its stable steady states. Our motivation for pulse-based control comes from applications in synthetic biology, where it is generally difficult to…

Optimization and Control · Mathematics 2015-10-05 Aivar Sootla , Diego Oyarzun , David Angeli , Guy-Bart Stan

A contemporary procedure to grow artificial tissue is to seed cells onto a porous biomaterial scaffold and culture it within a perfusion bioreactor to facilitate the transport of nutrients to growing cells. Typical models of cell growth for…

Tissues and Organs · Quantitative Biology 2018-05-01 Andrew L. Krause , Dmitry Beliaev , Robert A. Van Gorder , Sarah L. Waters

Topological defects are ubiquitous on surfaces with orientational order fields. Here, we study equilibrium states generated by the feedback between geometry and nematic order on fluid membranes with an integer topological defect. When the…

Soft Condensed Matter · Physics 2024-11-14 D. J. G. Pearce , C. Thibault , Q. Chaboche , C. Blanch-Mercader

The dynamics of cellular pattern formation is crucial for understanding embryonic development and tissue morphogenesis. Recent studies have shown that human dermal fibroblasts cultured on liquid crystal elastomers can exhibit an increase in…

Biological Physics · Physics 2023-08-25 Mengyang Gu , Xinyi Fang , Yimin Luo

How the cells break symmetry and organize their edge activity to move directionally is a fun- damental question in cell biology. Physical models of cell motility commonly rely on gradients of regulatory factors and/or feedback from the…

Many cell types spontaneously order like nematic liquid crystals, and, as such, they form topological defects. While defects with topological charge $\pm$1/2 are common in cell monolayers, the defects with charge $\pm$1, relevant in the…

Soft Condensed Matter · Physics 2019-12-09 Kirsten D. Endresen , MinSu Kim , Francesca Serra

A common developmental process, called branching morphogenesis, generates the epithelial trees in a variety of organs, including the lungs, kidneys, and glands. How branching morphogenesis can create epithelial architectures of very…

Tissues and Organs · Quantitative Biology 2021-03-02 Christine Lang , Lisa Conrad , Dagmar Iber

Designing reconfigurable materials based on deformable nanoparticles (NPs) hinges on an understanding of the energetically-favored shapes these NPs can adopt. Using simulations, we show that hollow, deformable patchy NPs tailored with…

Soft Condensed Matter · Physics 2021-01-04 Nicholas E. Brunk , JCS Kadupitiya , Vikram Jadhao

The mechanism by which cells measure the dimension of the organ in which they are embedded, and slow down their growth when the final size is reached, is a long-standing problem of developmental biology. The role of mechanics in this…

Biological Physics · Physics 2023-07-19 Alexander Erlich , Pierre Recho

The shapes of cell membranes are largely regulated by membrane associated, curvature active, proteins. We use a numerical model of the membrane with elongated membrane inclusions, recently developed by us, which posses spontaneous…

Biological Physics · Physics 2013-02-08 N. Ramakrishnan , P. B. Sunil Kumar , John H. Ipsen

Spatiotemporal patterns are common in biological systems. For electrically-coupled cells previous studies of pattern formation have mainly used external forcing as the main bifurcation parameter. The purpose of this paper is to show that…

Dynamical Systems · Mathematics 2021-11-02 H. O. Fatoyinbo , R. G. Brown , D. J. W. Simpson , B. van Brunt

Surface tension governed by differential adhesion can drive fluid particle mixtures to sort into separate regions, i.e., demix. Does the same phenomenon occur in confluent biological tissues? We begin to answer this question for epithelial…

Growing tissues are highly dynamic, flowing on sufficiently long time-scales due to cell proliferation, migration and tissue remodeling. As a consequence, living tissues can be approximated as liquids. This means the shape of microtissues…

Soft Condensed Matter · Physics 2021-12-17 Peter Fratzl , F. Dieter Fischer , Gerald A. Zickler , John W. C. Dunlop

Branching morphogenesis generates epithelial trees which facilitate gas exchange, filtering, as well as secretion processes with their large surface to volume ratio. In this review, we focus on the developmental mechanisms that control the…

Tissues and Organs · Quantitative Biology 2020-12-23 Dagmar Iber

Although materials and processes are different from biological cells', brain mimicries led to tremendous achievements in massively parallel information processing via neuromorphic engineering. Inexistent in electronics, we describe how to…

Disordered Systems and Neural Networks · Physics 2022-01-05 Kamila Janzakova , Ankush Kumar , Mahdi Ghazal , Anna Susloparova , Yannick Coffinier , Fabien Alibart , Sebastien Pecqueur