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Related papers: Shape Programming in Entropic Tissues

200 papers

I show the assumed Bilayer structure of cell membranes is Topologically falsified by known aminophospholipid dynamics in metabolically-active, Far from Equilibrium cells. The sensitivity of lipid and cytoplasmic flows to temperature,…

Biological Physics · Physics 2011-11-09 J. T. Lofthouse

Many proposals have already been made for realizing programmable matter, ranging from shape-changing molecules, DNA tiles, and synthetic cells to reconfigurable modular robotics. Envisioning systems of nano-sensors devices, we are…

Emerging Technologies · Computer Science 2015-04-09 Zahra Derakhshandeh , Robert Gmyr , Andrea W. Richa , Christian Scheideler , Thim Strothmann

Lipid membranes form the barrier between the inside and outside of cells and many of their subcompartments. As such, they bind to a wide variety of nano- and micrometer sized objects and, in the presence of strong adhesive forces, strongly…

Soft Condensed Matter · Physics 2021-08-31 Hendrik T. Spanke , Jaime Agudo-Canalejo , Daniel Tran , Robert W. Style , Eric R. Dufresne

We study theoretically the shapes of biological tubes affected by various pathologies. When epithelial cells grow at an uncontrolled rate, the negative tension produced by their division provokes a buckling instability. Several shapes are…

Biological Physics · Physics 2012-07-09 Edouard Hannezo , Jean-Francois Joanny , Jacques Prost

Tissue growth kinetics and interface dynamics depend on the properties of the tissue environment and cell-cell interactions. In cellular environments, substrate heterogeneity and geometry arise from a variety factors, such as the structure…

Soft Condensed Matter · Physics 2023-03-21 Mahmood Mazarei , Jan Astrom , Jan Westerlund , Mikko Karttunen

Topological defects play a central role in the physics of many materials, including magnets, superconductors and liquid crystals. In active fluids, defects become autonomous particles that spontaneously propel from internal active stresses…

Soft Condensed Matter · Physics 2024-06-12 Suraj Shankar , Luca V. D. Scharrer , Mark J. Bowick , M. Cristina Marchetti

We study the shapes of elastic membranes under the simultaneous exertion of tensile and compressive forces when the translational symmetry along the tension direction is broken. We predict a multitude of novel morphological phases in…

Soft Condensed Matter · Physics 2015-05-13 Benny Davidovitch

Using a popular vertex-based model to describe a spatially disordered planar epithelial monolayer, we examine the relationship between cell shape and mechanical stress at the cell and tissue level. Deriving expressions for stress tensors…

Cell Behavior · Quantitative Biology 2017-08-14 Alexander Nestor-Bergmann , Georgina Goddard , Sarah Woolner , Oliver Jensen

We present a topology grounded, multiscale simulation platform for morphogenesis and biological active matter. Morphogenesis and biological active matter represent keystone problems in biology with additional, far-reaching implications…

The ability of cells to reorganize in response to external stimuli is important in areas ranging from morphogenesis to tissue engineering. Elongated cells can co-align due to steric effects, forming states with local order. We show that…

In amorphous materials, plasticity is localized and occurs as shear transformations. It was recently shown by Wu et al. that these shear transformations can be predicted by applying topological defect concepts developed for liquid crystals…

Mesoscale and Nanoscale Physics · Physics 2024-01-17 Paul Desmarchelier , Spencer Fajardo , Michael L. Falk

We present a novel, physically-based morphing technique for elastic shapes, leveraging the differentiable material point method (MPM) with space-time control through per-particle deformation gradients to accommodate complex topology…

Graphics · Computer Science 2025-09-16 Michael Xu , Chang-Yong Song , David I. W. Levin , David Hyde

Inspired by recent experiments that highlight the role of nematic defects in the morphogenesis of epithelial tissues, we develop a minimal framework to study the dynamics of an active curved surface driven by its nematic texture. Allowing…

Soft Condensed Matter · Physics 2022-09-14 Farzan Vafa , L. Mahadevan

Complex tissue flows in epithelia are driven by intra- and inter-cellular processes that generate, maintain, and coordinate mechanical forces. There has been growing evidence that cell shape anisotropy, manifested as nematic order, plays an…

Soft Condensed Matter · Physics 2024-12-17 Jan Rozman , Chaithanya K. V. S. , Julia M. Yeomans , Rastko Sknepnek

The study of organoids, artificially grown cell aggregates with the functionality and small-scale anatomy of real organs, is one of the most active areas of research in biology and biophysics, yet the basic physical origins of their…

Biological Physics · Physics 2021-10-12 Jan Rozman , Matej Krajnc , Primož Ziherl

Collective cell migration is a highly regulated process involved in wound healing, cancer metastasis and morphogenesis. Mechanical interactions among cells provide an important regulatory mechanism to coordinate such collective motion.…

Soft Condensed Matter · Physics 2022-06-08 Xingbo Yang , Dapeng Bi , Michael Czajkowski , Matthias Merkel , M. Lisa Manning , M. Cristina Marchetti

During growth, tissue expands and deforms. Given its elastic properties, stresses emerge in an expanding and deforming tissue. Cell rearrangements can dissipate these stresses and numerous experiments confirm the viscoelastic properties of…

Tissues and Organs · Quantitative Biology 2017-10-20 M. D. Peters , D. Iber

Convergence-extension in embryos is controlled by chemical and mechanical signalling. A key cellular process is the exchange of neighbours via T1 transitions. We propose and analyse a model with positive feedback between recruitment of…

Biological Physics · Physics 2022-04-05 Rastko Sknepnek , Ilyas Djafer-Cherif , Manli Chuai , Cornelis J. Weijer , Silke Henkes

During the early-stages of embryo development, morphogenesis--- the emergence of shape and form in living organisms--- is almost exclusively associated with monolayers of tightly bound epithelial cells. To understand how such tissues change…

Soft Condensed Matter · Physics 2019-08-28 Richard G. Morris , Madan Rao

Robust empirical constitutive laws for granular materials in air or in a viscous fluid have been expressed in terms of timescales based on the dynamics of a single particle. However, some behaviours such as viscosity bifurcation or shear…

Soft Condensed Matter · Physics 2015-05-13 Pierre Rognon , Cyprien Gay