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Medical image segmentation has advanced rapidly over the past two decades, largely driven by deep learning, which has enabled accurate and efficient delineation of cells, tissues, organs, and pathologies across diverse imaging modalities.…

Image and Video Processing · Electrical Eng. & Systems 2025-08-29 Guoping Xu , Jayaram K. Udupa , Jax Luo , Songlin Zhao , Yajun Yu , Scott B. Raymond , Hao Peng , Lipeng Ning , Yogesh Rathi , Wei Liu , You Zhang

Deep learning has been widely used for medical image segmentation and a large number of papers has been presented recording the success of deep learning in the field. In this paper, we present a comprehensive thematic survey on medical…

Image and Video Processing · Electrical Eng. & Systems 2022-01-19 Risheng Wang , Tao Lei , Ruixia Cui , Bingtao Zhang , Hongying Meng , Asoke K. Nandi

MOTIVATION: Proteins fold into complex structures that are crucial for their biological functions. Experimental determination of protein structures is costly and therefore limited to a small fraction of all known proteins. Hence, different…

Biomolecules · Quantitative Biology 2018-04-18 David Menéndez Hurtado , Karolis Uziela , Arne Elofsson

Large-scale pre-training followed by downstream fine-tuning is an effective solution for transferring deep-learning-based models. Since finetuning all possible pre-trained models is computational costly, we aim to predict the…

Computer Vision and Pattern Recognition · Computer Science 2024-03-15 Zhao Wang , Aoxue Li , Zhenguo Li , Qi Dou

Accurate and reliable image segmentation is an essential part of biomedical image analysis. In this paper, we consider the problem of biomedical image segmentation using deep convolutional neural networks. We propose a new end-to-end…

Computer Vision and Pattern Recognition · Computer Science 2018-10-02 Amirhossein Dadashzadeh , Alireza Tavakoli Targhi

3D image segmentation plays an important role in biomedical image analysis. Many 2D and 3D deep learning models have achieved state-of-the-art segmentation performance on 3D biomedical image datasets. Yet, 2D and 3D models have their own…

Computer Vision and Pattern Recognition · Computer Science 2018-12-11 Hao Zheng , Yizhe Zhang , Lin Yang , Peixian Liang , Zhuo Zhao , Chaoli Wang , Danny Z. Chen

Deep learning has transformed computer vision but relies heavily on large labeled datasets and computational resources. Transfer learning, particularly fine-tuning pretrained models, offers a practical alternative; however, models…

Computer Vision and Pattern Recognition · Computer Science 2025-05-23 Iván Matas , Carmen Serrano , Miguel Nogales , David Moreno , Lara Ferrándiz , Teresa Ojeda , Begoña Acha

Deploying deep learning (DL) models in medical applications relies on predictive performance and other critical factors, such as conveying trustworthy predictive uncertainty. Uncertainty estimation (UE) methods provide potential solutions…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Kudaibergen Abutalip , Numan Saeed , Ikboljon Sobirov , Vincent Andrearczyk , Adrien Depeursinge , Mohammad Yaqub

Automatic segmentation of pathological shoulder muscles in patients with musculo-skeletal diseases is a challenging task due to the huge variability in muscle shape, size, location, texture and injury. A reliable fully-automated…

Computer Vision and Pattern Recognition · Computer Science 2020-04-28 Pierre-Henri Conze , Sylvain Brochard , Valérie Burdin , Frances T. Sheehan , Christelle Pons

Integrating multi-modal data to promote medical image analysis has recently gained great attention. This paper presents a novel scheme to learn the mutual benefits of different modalities to achieve better segmentation results for unpaired…

Computer Vision and Pattern Recognition · Computer Science 2023-05-02 Jie Yang , Ye Zhu , Chaoqun Wang , Zhen Li , Ruimao Zhang

Promptable segmentation foundation models have emerged as a transformative approach to addressing the diverse needs in medical images, but most existing models require expensive computing, posing a big barrier to their adoption in clinical…

Reliable perception during fast motion maneuvers or in high dynamic range environments is crucial for robotic systems. Since event cameras are robust to these challenging conditions, they have great potential to increase the reliability of…

Computer Vision and Pattern Recognition · Computer Science 2022-02-04 Nico Messikommer , Daniel Gehrig , Mathias Gehrig , Davide Scaramuzza

Machine learning on electromyography (EMG) has recently achieved remarkable success on a variety of tasks, while such success relies heavily on the assumption that the training and future data must be of the same data distribution. However,…

Signal Processing · Electrical Eng. & Systems 2022-10-14 Di Wu , Jie Yang , Mohamad Sawan

Transferability estimation has been attached to great attention in the computer vision fields. Researchers try to estimate with low computational cost the performance of a model when transferred from a source task to a given target task.…

Computation and Language · Computer Science 2023-12-11 Jun Bai , Xiaofeng Zhang , Chen Li , Hanhua Hong , Xi Xu , Chenghua Lin , Wenge Rong

This paper explores and enhances the application of Transfer Learning (TL) for multilabel image classification in medical imaging, focusing on brain tumor class and diabetic retinopathy stage detection. The effectiveness of TL-using…

Image and Video Processing · Electrical Eng. & Systems 2024-12-31 Md. Zehan Alam , Tonmoy Roy , H. M. Nahid Kawsar , Iffat Rimi

Malignant melanoma is the deadliest form of skin cancer and, in recent years, is rapidly growing in terms of the incidence worldwide rate. The most effective approach to targeted treatment is early diagnosis. Deep learning algorithms,…

Image and Video Processing · Electrical Eng. & Systems 2020-09-21 Mario Manzo , Simone Pellino

In recent years, machine learning has witnessed extensive adoption across various sectors, yet its application in medical image-based disease detection and diagnosis remains challenging due to distribution shifts in real-world data. In…

Machine Learning · Computer Science 2024-02-13 Masoumeh Javanbakhat , Md Tasnimul Hasan , Cristoph Lippert

Deep learning models have shown tremendous potential in learning representations, which are able to capture some key properties of the data. This makes them great candidates for transfer learning: Exploiting commonalities between different…

We propose an automatic preprocessing and ensemble learning for segmentation of cell images with low quality. It is difficult to capture cells with strong light. Therefore, the microscopic images of cells tend to have low image quality but…

Image and Video Processing · Electrical Eng. & Systems 2021-08-31 Sota Kato , Kazuhiro Hotta

A major challenge in stroke research and stroke recovery predictions is the determination of a stroke lesion's extent and its impact on relevant brain systems. Manual segmentation of stroke lesions from 3D magnetic resonance (MR) imaging…

Image and Video Processing · Electrical Eng. & Systems 2023-06-21 Sovesh Mohapatra , Advait Gosai , Anant Shinde , Aleksei Rutkovskii , Sirisha Nouduri , Gottfried Schlaug