Related papers: Computing SEQ-IC-LCS of Labeled Graphs
We introduce the class of interval $H$-graphs, which is the generalization of interval graphs, particularly interval bigraphs. For a fixed graph $H$ with vertices $a_1,a_2,\dots,a_k$, we say that an input graph $G$ with given partition…
In this paper we consider the problem of computing the $2$-vertex-connected components ($2$-vccs) of directed graphs. We present two new algorithms for solving this problem. The first algorithm runs in $O(mn^{2})$ time, the second in…
In fault-tolerant distance labeling we wish to assign short labels to the vertices of a graph $G$ such that from the labels of any three vertices $u,v,f$ we can infer the $u$-to-$v$ distance in the graph $G\setminus \{f\}$. We show that any…
An identifying code of a graph is a subset of its vertices such that every vertex of the graph is uniquely identified by the set of its neighbours within the code. We study the edge-identifying code problem, i.e. the identifying code…
The Longest Path Problem is a question of finding the maximum length between pairs of vertices of a graph. In the general case, the problem is NP-complete. However, there is a small collection of graph classes for which there exists an…
Semantic parsing is the task of producing structured meaning representations for natural language sentences. Recent research has pointed out that the commonly-used sequence-to-sequence (seq2seq) semantic parsers struggle to generalize…
Block graphs are graphs in which every block (biconnected component) is a clique. A graph $G=(V,E)$ is said to be an (unpartitioned) $k$-probe block graph if there exist $k$ independent sets $N_i\subseteq V$, $1\le i\le k$, such that the…
This paper studies the problem of graph-level clustering, which is a novel yet challenging task. This problem is critical in a variety of real-world applications such as protein clustering and genome analysis in bioinformatics. Recent years…
We present an exact algorithm for computing all common subgraphs with the maximum number of vertices across multiple graphs. Our approach is further extended to handle the connected Maximum Common Subgraph (MCS), identifying the largest…
In this work we study local computation with advice: the goal is to solve a graph problem $\Pi$ with a distributed algorithm in $T(\Delta)$ communication rounds, for some function $T$ that only depends on the maximum degree $\Delta$ of the…
In this paper, we revisit the much studied LCS problem for two given sequences. Based on the algorithm of Iliopoulos and Rahman for solving the LCS problem, we have suggested 3 new improved algorithms. We first reformulate the problem in a…
Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs…
In this paper we provide a principled approach to solve a transductive classification problem involving a similar graph (edges tend to connect nodes with same labels) and a dissimilar graph (edges tend to connect nodes with opposing…
One of the most critical problems in the field of string algorithms is the longest common subsequence problem (LCS). The problem is NP-hard for an arbitrary number of strings but can be solved in polynomial time for a fixed number of…
The Longest Common Subsequence (LCS) problem is a fundamental problem of sequence comparison. A natural approximation to this problem is a model in which every pairs of letters of two ``sequences'' are matched independently of the other…
We propose a novel way of generalizing the class of interval graphs, via a graph width parameter called the simultaneous interval number. This parameter is related to the simultaneous representation problem for interval graphs and defined…
Given a graph $G=(V, E)$, a connected sides cut $(U, V\backslash U)$ or $\delta (U)$ is the set of edges of E linking all vertices of U to all vertices of $V\backslash U$ such that the induced subgraphs $G[U]$ and $G[V\backslash U]$ are…
A pangenome captures the genetic diversity across multiple individuals simultaneously, providing a more comprehensive reference for genome analysis than a single linear genome, which may introduce allele bias. A widely adopted pangenome…
The capability of in-context learning (ICL) enables large language models (LLMs) to perform novel tasks without parameter updates by conditioning on a few input-output examples. However, collecting high-quality examples for new or…
Semantic parsing is the task of producing a structured meaning representation for natural language utterances or questions. Recent research has pointed out that the commonly-used sequence-to-sequence (seq2seq) semantic parsers struggle to…