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We present a spatially-extended system of chemical reactions exhibiting adaptation to time-dependent influxes of reactants. Here adaptation is defined as improved reproductive success, namely the ability of one of the many locally stable…

Statistical Mechanics · Physics 2025-12-02 Olivier Rivoire , Guy Bunin

Automated verification of living organism models allows us to gain previously unknown knowledge about underlying biological processes. In this paper, we show the benefits to use parametric time Petri nets in order to analyze precisely the…

Logic in Computer Science · Computer Science 2015-06-23 Alexander Andreychenko , Morgan Magnin , Katsumi Inoue

A new stochastic control problem of population dynamics under partial observation is formulated and analyzed both mathematically and numerically, with an emphasis on environmental and ecological problems. The decision-maker can only…

Optimization and Control · Mathematics 2020-04-13 Hidekazu Yoshioka , Yuta Yaegashi , Motoh Tsujimura

State-space models are dynamical systems defined by a latent and an observed process. In ecology, stochastic state-space models in discrete time are most often used to describe the imperfectly observed dynamics of population sizes or animal…

Methodology · Statistics 2025-08-13 Frederic Barraquand , Julien Gibaud

Surprise describes a range of phenomena from unexpected events to behavioral responses. We propose a measure of surprise and use it for surprise-driven learning. Our surprise measure takes into account data likelihood as well as the degree…

Machine Learning · Statistics 2017-03-03 Mohammadjavad Faraji , Kerstin Preuschoff , Wulfram Gerstner

We develop an efficient numerical method for the probabilistic quantification of the response statistics of nonlinear multi-degree-of-freedom structural systems under extreme forcing events, emphasizing accurate heavy-tail statistics. The…

Computational Engineering, Finance, and Science · Computer Science 2017-06-05 Han Kyul Joo , Mustafa A. Mohamad , Themistoklis P. Sapsis

This work addresses challenges in evaluating adaptive artificial intelligence (AI) models for medical devices, where iterative updates to both models and evaluation datasets complicate performance assessment. We introduce a novel approach…

Artificial Intelligence · Computer Science 2026-04-07 Alexis Burgon , Berkman Sahiner , Nicholas A Petrick , Gene Pennello , Ravi K Samala

Biological systems (among others) may respond to a large variety of distinct external stimuli, or signals. These perturbations will generally be presented to the system not singly, but in various combinations, so that a proper understanding…

Quantitative Methods · Quantitative Biology 2011-06-24 Dennis Wylie

We have analyzed phenology data and protein configurations from molecular dynamics simulations with the nonlinear forecasting method proposed by May and Sugihara. Our primary focus in this work is to characterize the dynamic state of a…

In the face of uncertain biological response to climate change and the many critiques concerning model complexity it is increasingly important to develop predictive mechanistic frameworks that capture the dominant features of ecological…

Populations and Evolution · Quantitative Biology 2015-06-05 Christopher P. Kempes , Sungho Choi , William Dooris , Geoffrey B. West

A probabilistic model describes a system in its observational state. In many situations, however, we are interested in the system's response under interventions. The class of structural causal models provides a language that allows us to…

Methodology · Statistics 2020-01-20 Jonas Peters , Stefan Bauer , Niklas Pfister

We address the reachability problem for continuous-time stochastic dynamic systems. Our objective is to present a unified framework that characterizes the reachable set of a dynamic system in the presence of both stochastic disturbances and…

Systems and Control · Electrical Eng. & Systems 2024-09-04 Saber Jafarpour , Zishun Liu , Yongxin Chen

Theoretical studies have shown that stochasticity can affect the dynamics of ecosystems in counter-intuitive ways. However, without knowing the equations governing the dynamics of populations or ecosystems, it is difficult to ascertain the…

Quantitative Methods · Quantitative Biology 2024-09-24 Arshed Nabeel , Ashwin Karichannavar , Shuaib Palathingal , Jitesh Jhawar , David B. Brückner , Danny Raj M. , Vishwesha Guttal

Bistable biological regulatory systems need to cope with stochastic noise to fine-tune their function close to bifurcation points. Here, we study stability properties of this regime in generic systems to demonstrate that cooperative…

Adaptation and Self-Organizing Systems · Physics 2025-08-04 Daniele Proverbio , Arthur N. Montanari , Alexander Skupin , Jorge Gonçalves

Control systems should enforce a desired property for both expected modeled situations as well as unexpected unmodeled environmental situations. Existing methods focus on designing controllers to enforce the desired property only when the…

Systems and Control · Electrical Eng. & Systems 2021-10-19 Rômulo Meira-Góes , Eunsuk Kang , Stéphane Lafortune , Stavros Tripakis

The main challenge for adaptive regulation of linear-quadratic systems is the trade-off between identification and control. An adaptive policy needs to address both the estimation of unknown dynamics parameters (exploration), as well as the…

Systems and Control · Computer Science 2019-04-01 Mohamad Kazem Shirani Faradonbeh , Ambuj Tewari , George Michailidis

One calls attention to the fact that the stochastic physical systems are not random completely. They have both random and regular components of their evolution. Dynamic system is considered to be a special case of physical system with…

General Physics · Physics 2007-05-23 Yuri A. Rylov

As all physical adaptive quantum-enhanced metrology schemes operate under noisy conditions with only partially understood noise characteristics, so a practical control policy must be robust even for unknown noise. We aim to devise a test to…

Quantum Physics · Physics 2019-07-18 Pantita Palittapongarnpim , Barry C. Sanders

Antifragility is a property that enhances the capability of a system in response to external perturbations. Although the concept has been applied in many areas, a practical measure of antifragility has not been developed yet. Here we…

Adaptation and Self-Organizing Systems · Physics 2026-02-04 Omar K. Pineda , Hyobin Kim , Carlos Gershenson

We evaluate the robustness of several large language models on multiple datasets. Robustness here refers to the relative insensitivity of the model's answers to meaning-preserving variants of their input. Benchmark datasets are constructed…

Computation and Language · Computer Science 2024-11-05 Samuel Ackerman , Ella Rabinovich , Eitan Farchi , Ateret Anaby-Tavor
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