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The reproduction and replication of research results has become a major issue for a number of scientific disciplines. In computer science and related computational disciplines such as systems biology, the challenges closely revolve around…

Software Engineering · Computer Science 2017-07-31 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

Most existing pre-trained language models for source code focus on learning the static code text, typically augmented with static code structures (abstract syntax tree, dependency graphs, etc.). However, program semantics will not be fully…

Software Engineering · Computer Science 2023-06-14 Yangruibo Ding , Ben Steenhoek , Kexin Pei , Gail Kaiser , Wei Le , Baishakhi Ray

In many academic disciplines, software is created during the research process or for a research purpose. The crucial role of software for research is increasingly acknowledged. The application of software engineering to research software…

Software Engineering · Computer Science 2025-12-02 Stephan Druskat , Lars Grunske

Frequently in socio-environmental sciences, models are used as tools to represent, understand, project and predict the behaviour of these complex systems. Along the modelling chain, Good Modelling Practices have been evolving that ensure -…

Software Engineering · Computer Science 2024-09-24 Carsten Lemmen , Philipp Sebastian Sommer

Open-sourcing research publications is a key enabler for the reproducibility of studies and the collective scientific progress of a research community. As all fields of science develop more advanced algorithms, we become more dependent on…

Systems and Control · Electrical Eng. & Systems 2023-08-22 Siqi Zhou , Lukas Brunke , Allen Tao , Adam W. Hall , Federico Pizarro Bejarano , Jacopo Panerati , Angela P. Schoellig

Measuring and evaluating source code similarity is a fundamental software engineering activity that embraces a broad range of applications, including but not limited to code recommendation, duplicate code, plagiarism, malware, and smell…

Software Engineering · Computer Science 2023-06-29 Morteza Zakeri-Nasrabadi , Saeed Parsa , Mohammad Ramezani , Chanchal Roy , Masoud Ekhtiarzadeh

This study aims to enhance the maintainability of code generated by Large Language Models (LLMs), with a focus on the Python programming language. As the use of LLMs for coding assistance grows, so do concerns about the maintainability of…

Software Engineering · Computer Science 2024-08-20 Karthik Shivashankar , Antonio Martini

In particular, large-scale deep learning and artificial intelligence model training uses a lot of computational power and energy, so it poses serious sustainability issues. The fast rise in model complexity has resulted in exponential…

Hardware Architecture · Computer Science 2025-08-20 Yashasvi Makin , Rahul Maliakkal

Many disciplines use standard examples for education and to share and compare research results. The examples are rich enough to study from multiple points of view; they are often called model problems. Software design lacks such a community…

Software Engineering · Computer Science 2025-03-11 Mary Shaw , Marian Petre

Does the choice of programming language affect energy consumption? Previous highly visible studies have established associations between certain programming languages and energy consumption. A causal misinterpretation of this work has led…

Programming Languages · Computer Science 2025-10-06 Nicolas van Kempen , Hyuk-Je Kwon , Dung Tuan Nguyen , Emery D. Berger

Large language models (LLMs) are rapidly transforming materials science. This review examines recent LLM applications across the materials discovery pipeline, focusing on three key areas: mining scientific literature , predictive modelling,…

Computation and Language · Computer Science 2025-11-17 Fengxu Yang , Weitong Chen , Jack D. Evans

Context: Writing Clean Code understandable by other collaborators has become crucial to enhancing collaboration and productivity. However, very little is known regarding whether developers agree with Clean Code Principles and how they apply…

Software Engineering · Computer Science 2022-08-16 Kevin Ljung , Javier Gonzalez-Huerta

This paper provides a survey of the emerging area of Large Language Models (LLMs) for Software Engineering (SE). It also sets out open research challenges for the application of LLMs to technical problems faced by software engineers. LLMs'…

Software Engineering · Computer Science 2023-11-14 Angela Fan , Beliz Gokkaya , Mark Harman , Mitya Lyubarskiy , Shubho Sengupta , Shin Yoo , Jie M. Zhang

Achieving the UN Sustainable Development Goals (SDGs) demands adequate levels of awareness and actions to address sustainability challenges. Software systems will play an important role in moving towards these targets. Sustainability skills…

Natural language processing has improved tremendously after the success of word embedding techniques such as word2vec. Recently, the same idea has been applied on source code with encouraging results. In this survey, we aim to collect and…

Machine Learning · Computer Science 2019-04-08 Zimin Chen , Martin Monperrus

Reproducibility is inseparable from transparency, as sharing data, code and computational environment is a pre-requisite for being able to retrace the steps of producing the research results. Others have made the case that this artifact…

Computers and Society · Computer Science 2022-05-19 Lorena A. Barba

Retrieving data from large-scale source code archives is vital for AI training, neural-based software analysis, and information retrieval, to cite a few. This paper studies and experiments with the design of a compressed key-value store for…

Data Structures and Algorithms · Computer Science 2026-01-21 Paolo Ferragina , Francesco Tosoni

Currently, data-intensive scientific applications require vast amounts of compute resources to deliver world-leading science. The climate emergency has made it clear that unlimited use of resources (e.g., energy) for scientific discovery is…

Instrumentation and Methods for Astrophysics · Physics 2024-12-12 P. Chris Broekema , Rob V. van Nieuwpoort

Case study-based learning has been successfully integrated into various courses, including software engineering education. In the context of software design courses, the use of case studies often entails sharing of real successful or failed…

Software Engineering · Computer Science 2023-01-13 Chun Yong Chong , Eunsuk Kang , Mary Shaw

Reasoning about code and explaining its purpose are fundamental skills for computer scientists. There has been extensive research in the field of computing education on the relationship between a student's ability to explain code and other…

Computers and Society · Computer Science 2024-04-03 Juho Leinonen , Paul Denny , Stephen MacNeil , Sami Sarsa , Seth Bernstein , Joanne Kim , Andrew Tran , Arto Hellas