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We introduce top trees as a design of a new simpler interface for data structures maintaining information in a fully-dynamic forest. We demonstrate how easy and versatile they are to use on a host of different applications. For example, we…

Data Structures and Algorithms · Computer Science 2007-05-23 Stephen Alstrup , Jacob Holm , Kristian de Lichtenberg , Mikkel Thorup

We consider the problem of assigning short labels to the vertices and edges of a graph $G$ so that given any query $\langle s,t,F\rangle$ with $|F|\leq f$, we can determine whether $s$ and $t$ are still connected in $G-F$, given only the…

Data Structures and Algorithms · Computer Science 2024-10-25 Yaowei Long , Seth Pettie , Thatchaphol Saranurak

In the online Steiner tree problem, the input is a set of vertices that appear one-by-one, and we have to maintain a Steiner tree on the current set of vertices. The cost of the tree is the total length of edges in the tree, and we want…

Data Structures and Algorithms · Computer Science 2013-12-30 Anupam Gupta , Amit Kumar

We give a short and direct proof of a remarkable identity that arises in the enumeration of labeled trees with respect to their indegree sequence, where all edges are oriented from the vertex with lower label towards the vertex with higher…

Combinatorics · Mathematics 2016-01-20 Stephan Wagner

Reconfiguration problems involve determining whether two given configurations can be transformed into each other under specific rules. The Token Sliding problem asks whether, given two different set of tokens on vertices of a graph $G$, we…

Data Structures and Algorithms · Computer Science 2026-03-26 Niranka Banerjee , Christian Engels , Duc A. Hoang

We define a suffixient set for a text $T [1..n]$ to be a set $S$ of positions between 1 and $n$ such that, for any edge descending from a node $u$ to a node $v$ in the suffix tree of $T$, there is an element $s \in S$ such that $u$'s path…

Data Structures and Algorithms · Computer Science 2024-06-06 Lore Depuydt , Travis Gagie , Ben Langmead , Giovanni Manzini , Nicola Prezza

We present a Las Vegas algorithm for dynamically maintaining a minimum spanning forest of an $n$-node graph undergoing edge insertions and deletions. Our algorithm guarantees an $O(n^{o(1)})$ worst-case update time with high probability.…

Data Structures and Algorithms · Computer Science 2017-08-16 Danupon Nanongkai , Thatchaphol Saranurak , Christian Wulff-Nilsen

It was recently found that there are very close connections between the existence of additive spanners (subgraphs where all distances are preserved up to an additive stretch), distance preservers (subgraphs in which demand pairs have their…

Data Structures and Algorithms · Computer Science 2016-07-21 Eden Chlamtáč , Michael Dinitz , Guy Kortsarz , Bundit Laekhanukit

In a variety of applications, we need to keep track of the development of a data set over time. For maintaining and querying this multi version data I/O-efficiently, external memory data structures are required. In this paper, we present a…

General Literature · Computer Science 2007-05-23 Saju Jude Dominic , G. Sajith

The suffix array is a classic full-text index, combining effectiveness with simplicity. We discuss three approaches aiming to improve its efficiency even more: changes to the navigation, data layout and adding extra data. In short, we show…

Data Structures and Algorithms · Computer Science 2016-07-28 Tomasz Kowalski , Szymon Grabowski , Kimmo Fredriksson , Marcin Raniszewski

Finding the shortest path distance between an arbitrary pair of vertices is a fundamental problem in graph theory. A tremendous amount of research has been successfully attempted on this problem, most of which is limited to static graphs.…

Data Structures and Algorithms · Computer Science 2021-02-18 Muhammad Farhan , Qing Wang

Efficient text indexing data structures have enabled large-scale genomic sequence analysis and are used to help solve problems ranging from assembly to read mapping. However, these data structures typically assume that the underlying…

Genomics · Quantitative Biology 2016-04-13 Nitish Gupta , Komal Sanjeev , Tim Wall , Carl Kingsford , Rob Patro

Previous work on Dynamic Complexity has established that there exist dynamic constant-time parallel algorithms for regular tree languages and context-free languages under label or symbol changes. However, these algorithms were not developed…

Data Structures and Algorithms · Computer Science 2023-07-20 Jonas Schmidt , Thomas Schwentick , Jennifer Todtenhoefer

Cartesian tree matching is a form of generalized pattern matching where a substring of the text matches with the pattern if they share the same Cartesian tree. This form of matching finds application for time series of stock prices and can…

Data Structures and Algorithms · Computer Science 2024-11-20 Eric M. Osterkamp , Dominik Köppl

In this paper we consider the following modification of the iterative search problem. We are given a tree $T$, so that a dynamic catalog $C(v)$ is associated with every tree node $v$. For any $x$ and for any node-to-root path $\pi$ in $T$,…

Data Structures and Algorithms · Computer Science 2010-07-21 Yakov Nekrich

We present a new algorithm for maintaining a DFS tree of an arbitrary directed graph under any sequence of edge insertions. Our algorithm requires a total of $O(m\cdot n)$ time in the worst case to process a sequence of edge insertions,…

Data Structures and Algorithms · Computer Science 2022-02-24 Giorgio Ausiello , Paolo G. Franciosa , Giuseppe F. Italiano , Andrea Ribichini

We give an algorithm to enumerate the results on trees of monadic second-order (MSO) queries represented by nondeterministic tree automata. After linear time preprocessing (in the input tree), we can enumerate answers with linear delay (in…

Databases · Computer Science 2019-08-28 Antoine Amarilli , Pierre Bourhis , Stefan Mengel , Matthias Niewerth

We are concentrating on reducing overhead of heaps based on comparisons with optimal worstcase behaviour. The paper is inspired by Strict Fibonacci Heaps [1], where G. S. Brodal, G. Lagogiannis, and R. E. Tarjan implemented the heap with…

Data Structures and Algorithms · Computer Science 2019-11-27 Vladan Majerech

We propose a Label Propagation based algorithm for weakly supervised text classification. We construct a graph where each document is represented by a node and edge weights represent similarities among the documents. Additionally, we…

Computation and Language · Computer Science 2017-12-08 Sachin Pawar , Nitin Ramrakhiyani , Swapnil Hingmire , Girish K. Palshikar

In this paper, we study the problem of fast dynamic pointer following: given a directed graph $G$ where each vertex has outdegree $1$, efficiently support the operations of i) changing the outgoing edge of any vertex, and ii) find the…

Data Structures and Algorithms · Computer Science 2014-05-16 Erik Demaine , Nathan Pinsker , Jon Schneider
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