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Response surface designs are usually described as being run under complete randomization of the treatment combinations to the experimental units. In practice, however, it is often necessary or beneficial to run them under some kind of…

Methodology · Statistics 2024-10-25 Luzia A. Trinca , Steven G. Gilmour

Allosteric interactions occur when binding at one part of a complex affects the interactions at another part. Allostery offers a high degree of control in multi-species processes, and these interactions play a crucial role in many…

Soft Condensed Matter · Physics 2025-07-14 Jakob Metson

We introduce meta-diastereomers, hybrid systems where molecular chirality ($\leq 10$\,nm) and nanoscale chirality ($>100$\,nm) combine to create a new hierarchical chiral state with emergent optical properties. By coupling chiral…

In the present paper we address the general problem of selective electrodynamic interactions between DNA and protein, which is motivated by decades of theoretical study and our very recent experimental findings (M. Lechelon et al,…

Biological Physics · Physics 2024-12-18 E. Faraji , P. Kurian , R. Franzosi , S. Mancini , E. Floriani , V. Calandrini , G. Pettini , M. Pettini

DNA nanostar (DNAns) hydrogels are promising materials for in vivo applications, including tissue regeneration and drug and antibody delivery. However, a systematic and quantitative understanding of the design principles controlling their…

From the point of view of the human brain, continual learning can perform various tasks without mutual interference. An effective way to reduce mutual interference can be found in sparsity and selectivity of neurons. According to Aljundi et…

Machine Learning · Computer Science 2024-10-04 Jin Hyun Park

Gene expression and regulation rely on an apparently finely tuned set of reactions between some proteins and DNA. Such DNA-binding proteins have to find specific sequences on very long DNA molecules and they mostly do so in absence of any…

Biological Physics · Physics 2013-12-02 Maria Barbi , Fabien Paillusson

Eukaryotic cells generally sense chemical gradients using the binding of chemical ligands to membrane receptors. In order to perform chemotaxis effectively in different environments, cells need to adapt to different concentrations. We…

Cell Behavior · Quantitative Biology 2026-04-20 Vishnu Srinivasan , Wei Wang , Brian A. Camley

Fibrillar adhesion, observed in animals like beetles, spiders, and geckos, relies on nanoscopic or microscopic fibrils to enhance surface adhesion via 'contact splitting.' This concept has inspired engineering applications across robotics,…

Machine Learning · Computer Science 2024-10-08 Mohammad Shojaeifard , Matteo Ferraresso , Alessandro Lucantonio , Mattia Bacca

Surfaces are at the frontier of every known solid. They provide versatile supports for functional nanostructures and mediate essential physicochemical processes. Being intimately related with 2D materials, interfaces and atomically thin…

We consider stochastic systems of interacting particles or agents, with dynamics determined by an interaction kernel which only depends on pairwise distances. We study the problem of inferring this interaction kernel from observations of…

Statistics Theory · Mathematics 2020-07-31 Fei Lu , Mauro Maggioni , Sui Tang

The possibility of prescribing local interactions between nano- and microscopic components that direct them to assemble in a predictable fashion is a central goal of nanotechnology research. In this article we advance a new paradigm in…

Optoelectronic micro- and nanostructures have a vast parameter space to explore for modification and optimisation of their functional performance. This paper reports on a data-led approach using high-throughput single nanostructure…

We develop revised theoretical ideas on the mechanism by which the transcription factor proteins locate their specific binding sites on DNA faster than the three-dimensional (3D) diffusion controlled rate limit. We demonstrate that the…

Biological Physics · Physics 2014-09-22 Rajamanickam Murugan

We introduce a coarse-grained model of DNA with bases modeled as rigid-body ellipsoids to capture their anisotropic stereochemistry. Interaction potentials are all physicochemical and generated from all-atom simulation/parameterization with…

Soft Condensed Matter · Physics 2015-05-14 Alex Morriss-Andrews , Joerg Rottler , Steven S. Plotkin

Modern recommender systems often deal with a variety of user interactions, e.g., click, forward, purchase, etc., which requires the underlying recommender engines to fully understand and leverage multi-behavior data from users. Despite…

Information Retrieval · Computer Science 2023-05-30 Jingcao Xu , Chaokun Wang , Cheng Wu , Yang Song , Kai Zheng , Xiaowei Wang , Changping Wang , Guorui Zhou , Kun Gai

Multifunctional nanomaterials combining diagnosis and therapeutic properties have attracted a considerable attention in cancer research. Yet some important challenges are still to be faced, including an optimal coupling between these two…

Biological Physics · Physics 2019-10-31 Yupeng Shi , Flavien Guenneau , Xiaolin Wang , Christophe Hélary , Thibaud Coradin

Carefully designed nanostructures can inspire new type of optomechanical interactions and allow surpassing limitations set by classical diffractive optical elements. Apart from strong near-field localization, nanostructured environment…

The multilayer network framework has served to describe and uncover a number of novel and unforeseen physical behaviors and regimes in interacting complex systems. However, the majority of existing studies are built on undirected multilayer…

Physics and Society · Physics 2020-11-03 Xiangrong Wang , Alejandro Tejedor , Yi Wang , Yamir Moreno

The ability to tailor nanoscale surface atom arrangements through multi-elemental compositional control provides high-entropy nanoalloys with promising functional properties. Developing a fundamental understanding of nanoalloy formation…

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