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Related papers: A Comparison of Neuroelectrophysiology Databases

200 papers

The exponential growth of neuroscientific data necessitates platforms that facilitate data management and multidisciplinary collaboration. In this paper, we introduce Pennsieve - an open-source, cloud-based scientific data management…

Computers and Society · Computer Science 2024-09-24 Zack Goldblum , Zhongchuan Xu , Haoer Shi , Patryk Orzechowski , Jamaal Spence , Kathryn A Davis , Brian Litt , Nishant Sinha , Joost Wagenaar

We organized a workshop on the "Present and Future Frameworks of Theoretical Neuroscience", with the support of the National Science Foundation. The objective was to identify the challenges and strategies that this field will need to tackle…

Neurons and Cognition · Quantitative Biology 2020-04-06 Horacio G. Rotstein , Fidel Santamaria

The ethical and legal imperative to share research data without causing harm requires careful attention to privacy risks. While mounting evidence demonstrates that data sharing benefits science, legitimate concerns persist regarding the…

Deep learning and large public datasets have recently catalyzed the proliferation of AI models for processing brain recordings. However, systematically evaluating these models remains a challenge: not only do the preprocessing pipelines,…

Brain imaging analysis is fundamental in neuroscience, providing valuable insights into brain structure and function. Traditional workflows follow a sequential pipeline-brain extraction, registration, segmentation, parcellation, network…

Image and Video Processing · Electrical Eng. & Systems 2025-02-27 Yao Su , Keqi Han , Mingjie Zeng , Lichao Sun , Liang Zhan , Carl Yang , Lifang He , Xiangnan Kong

Making all data for any observation or experiment openly available is a defining feature of empirical science (e.g., nullius in verba, the motto of the Royal Society). It enhances transparency, reproducibility, and societal trust. While…

Neurons and Cognition · Quantitative Biology 2022-12-19 Saskia E. J. de Vries , Joshua H. Siegle , Christof Koch

Brain foundation models bring the foundation model paradigm to the field of neuroscience. Like language and image foundation models, they are general-purpose AI systems pretrained on large-scale datasets that adapt readily to downstream…

Computers and Society · Computer Science 2026-02-04 Margot Hanley , Jiunn-Tyng Yeh , Ryan Rodriguez , Jack Pilkington , Nita Farahany

Across the life sciences, an ongoing effort over the last 50 years has made data and methods more reproducible and transparent. This openness has led to transformative insights and vastly accelerated scientific progress. For example,…

Neurons and Cognition · Quantitative Biology 2026-02-25 Colleen J. Gillon , Cody Baker , Ryan Ly , Edoardo Balzani , Bingni W. Brunton , Manuel Schottdorf , Satrajit Ghosh , Nima Dehghani

Exceptional growth in the availability of large-scale clinical imaging datasets has led to the development of computational infrastructures offering scientists access to image repositories and associated clinical variables data. The EU FP7…

Databases · Computer Science 2015-12-01 Kamran Munir , Khawar Hasham Ahmad , Richard McClatchey

Brain-computer interfaces (BCIs) are moving rapidly from laboratory research into clinical, edge, and real-world settings. Under ISO/IEC 8663:2025, a BCI is a direct communication link between central nervous system activity and external…

Artificial Intelligence · Computer Science 2026-05-13 Lei Sun , Xiuqing Mao , Shuai Zhang , Qingyu Zeng , Min Zhao , Jiyuan Li , Wenle Dong

The integration of diverse clinical modalities such as medical imaging and the tabular data extracted from patients' Electronic Health Records (EHRs) is a crucial aspect of modern healthcare. Integrative analysis of multiple sources can…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Daniel Duenias , Brennan Nichyporuk , Tal Arbel , Tammy Riklin Raviv

Neuroscience research has expanded dramatically over the past 30 years by advancing standardization and tool development to support rigor and transparency. Consequently, the complexity of the data pipeline has also increased, hindering…

Objective. This study conduct an extensive Brain-computer interfaces (BCI) reproducibility analysis on open electroencephalography datasets, aiming to assess existing solutions and establish open and reproducible benchmarks for effective…

Signal Processing · Electrical Eng. & Systems 2024-04-25 Sylvain Chevallier , Igor Carrara , Bruno Aristimunha , Pierre Guetschel , Sara Sedlar , Bruna Lopes , Sebastien Velut , Salim Khazem , Thomas Moreau

The increasing availability of brain data within and outside the biomedical field, combined with the application of artificial intelligence (AI) to brain data analysis, poses a challenge for ethics and governance. We identify distinctive…

The auto feature extraction capability of deep neural networks (DNN) endows them the potentiality for analysing complicated electroencephalogram (EEG) data captured from brain functionality research. This work investigates the potential…

Neurons and Cognition · Quantitative Biology 2021-02-23 Yurui Ming

Digital services such as repositories and science gateways have become key resources for the neuroscience community, but users often have a hard time orienting themselves in the service landscape to find the best fit for their particular…

Neural electrical activity is fundamental to brain function, underlying a range of cognitive and behavioral processes, including movement, perception, decision-making, and consciousness. Abnormal patterns of neural signaling often indicate…

Neurons and Cognition · Quantitative Biology 2025-09-03 Zhizhang Yuan , Fanqi Shen , Meng Li , Yuguo Yu , Chenhao Tan , Yang Yang

The application of psychophysiology in human-computer interaction is a growing field with significant potential for future smart personalised systems. Working in this emerging field requires comprehension of an array of physiological…

Human-Computer Interaction · Computer Science 2016-09-06 Lauri Ahonen , Benjamin Cowley

High-resolution neural datasets enable foundation models for the next generation of brain-computer interfaces and neurological treatments. The community requires rigorous benchmarks to discriminate between competing modeling approaches, yet…

The amount of biomedical data continues to grow rapidly. However, the ability to analyze these data is limited due to privacy and regulatory concerns. Machine learning approaches that require data to be copied to a single location are…

Machine Learning · Computer Science 2021-02-18 Dimitris Stripelis , Jose Luis Ambite , Pradeep Lam , Paul Thompson