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We model an epidemic where the per-person infectiousness in a network of geographic localities changes with the total number of active cases. This would happen as people adopt more stringent non-pharmaceutical precautions when the…

Social and Information Networks · Computer Science 2021-12-07 Akhil Bhimaraju , Avhishek Chatterjee , Lav R. Varshney

Mass extinction is a phenomenon in the history of life on Earth when a considerable number of species go extinct over a relatively short period of time. The magnitude of extinction varies between the events, the most well known are the…

Adaptation and Self-Organizing Systems · Physics 2022-08-29 Amer Alsulami , Sergei Petrovskii

This paper deals with an impulsive degenerate logistic model, where pulses are introduced for modeling interventions or disturbances, and degenerate logistic term may describe refugees or protections zones for the species. Firstly, the…

Populations and Evolution · Quantitative Biology 2024-02-20 Willian Cintra , Zhigui Lin , Carlos Alberto Santos , Phyu Phyu Win

The spread of a particular trait in a cell population often is modelled by an appropriate system of ordinary differential equations describing how the sizes of subpopulations of the cells with the same genome change in time. On the other…

Dynamical Systems · Mathematics 2016-05-26 J. Banasiak , A. Falkiewicz

To study later spatial evolutionary games based on the multitype contact process, we first focus in this paper on the conditions for survival/extinction in the presence of only one strategy, in which case our model consists of a variant of…

Probability · Mathematics 2025-07-09 Jonas Köppl , Nicolas Lanchier , Max Mercer

Extinction of a long-lived isolated stochastic population can be described as an exponentially slow decay of quasi-stationary probability distribution of the population size. We address extinction of a population in a two-population system…

Statistical Mechanics · Physics 2015-05-14 Michael Khasin , Baruch Meerson , Pavel V. Sasorov

We derive a simple expression for the tail-asymptotics of an explosive birth process at a fixed observation time conditioned on non-explosion. Using the well-established exponential embedding, we apply this result to compute the tail…

Probability · Mathematics 2024-06-24 Thomas Gottfried , Stefan Grosskinsky

The question of whether biological populations survive or are eventually driven to extinction has long been examined using mathematical models. In this work we study population survival or extinction using a stochastic, discrete…

Populations and Evolution · Quantitative Biology 2021-09-15 Yifei Li , Stuart T. Johnston , Pascal R. Buenzli , Peter van Heijster , Matthew J. Simpson

Species populations often modify their environment as they grow. When environmental feedback operates more slowly than population growth, the system can undergo boom-bust dynamics, where the population overshoots its carrying capacity and…

Populations and Evolution · Quantitative Biology 2026-05-27 Pablo Moreno-Spiegelberg , Javier Aguilar

Maintenance and regeneration of adult tissues rely on the self-renewal of stem cells. Regeneration without over-proliferation requires precise regulation of the stem cell proliferation and differentiation rates. The nature of such…

Populations and Evolution · Quantitative Biology 2022-12-19 Rodrigo García-Tejera , Linus Schumacher , Ramon Grima

An early burst of speciation followed by a subsequent slowdown in the rate of diversification is commonly inferred from molecular phylogenies. This pattern is consistent with some verbal theory of ecological opportunity and adaptive…

Populations and Evolution · Quantitative Biology 2015-06-11 Matthew W. Pennell , Brice A. J. Sarver , Luke J. Harmon

Stochastic models that incorporate birth, death and immigration (also called birth-death and innovation models) are ubiquitous and applicable to many research topics such as quantifying species sizes in ecological populations, describing…

Populations and Evolution · Quantitative Biology 2026-05-12 Renaud Dessalles , Maria D'Orsogna , Tom Chou

Species extinction occurs regularly and unavoidably in ecological systems. The time scales for extinction can broadly vary and inform on the ecosystem's stability. We study the spatio-temporal extinction dynamics of a paradigmatic…

Populations and Evolution · Quantitative Biology 2011-03-02 S. Rulands , T. Reichenbach , E. Frey

This manuscript proposes a significant step in our long-run investigation of infant mortality across species. Since 2016 (Berrut et al. 2016) a succession of studies (Bois et al. 2019) have traced infant mortality from organisms of high…

Cell Behavior · Quantitative Biology 2021-03-26 Eduardo M. Garcia-Roger , Peter Richmond , Bertrand M. Roehner

Birth-death processes track the size of a univariate population, but many biological systems involve interaction between populations, necessitating models for two or more populations simultaneously. A lack of efficient methods for…

Computation · Statistics 2017-08-08 Lam Si Tung Ho , Jason Xu , Forrest W. Crawford , Vladimir N. Minin , Marc A. Suchard

We introduce a new model for large scale evolution and extinction in which species are organized into food chains. The system evolves by two processes: origination/speciation and extinction. In the model, extinction of a given species can…

Statistical Mechanics · Physics 2007-05-23 Luis A. N. Amaral , Martin Meyer

We study a continuous time branching process where an individual splits into two daughters with rate b and dies with rate a, starting from a single individual at t=0. We show that the model can be mapped exactly to a random walk problem…

Statistical Mechanics · Physics 2026-02-13 Satya N. Majumdar , Alberto Rosso

We prove a scaling limit theorem for two-type Galton-Waston branching processes with interaction. The limit theorem gives rise to a class of mixed state branching processes with interaction using to simulate the evolution for cell division…

Probability · Mathematics 2023-11-21 Shukai Chen , Lina Ji , Jie Xiong

We introduce a general class of branching Markov processes for the modelling of a parasite infection in a cell population. Each cell contains a quantity of parasites which evolves as a diffusion with positive jumps. The drift, diffusive…

Probability · Mathematics 2023-08-31 Aline Marguet , Charline Smadi

We study the stochastic evolution of four species in cyclic competition in a well mixed environment. In systems composed of a finite number $N$ of particles these simple interaction rules result in a rich variety of extinction scenarios,…

Statistical Mechanics · Physics 2012-07-09 C. H. Durney , S. O. Case , M. Pleimling , R. K. P. Zia
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