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Multistep denaturation in a short circular DNA molecule is analyzed by a mesoscopic Hamiltonian model which accounts for the helicoidal geometry. Computation of melting profiles by the path integral method suggests that stacking…

Soft Condensed Matter · Physics 2012-04-13 Marco Zoli

In this paper, a complete classification of finite simple cubic vertex-transitive graphs of girth $6$ is obtained. It is proved that every such graph, with the exception of the Desargues graph on $20$ vertices, is either a skeleton of a…

Combinatorics · Mathematics 2025-01-06 Primož Potočnik , Janoš Vidali

In a gravitational virialized bound system built up of two components, one of which is embedded in the other, the Clausius' virial energy of one subcomponent is not, in general, equal to its total potential energy, as occurs in a single…

Astrophysics · Physics 2009-11-07 C. Marmo , L. Secco

Replacing vector type of interaction of the Thirring-Wess model by the chiral type a new model is presented which is termed here as chiral Thirring-Wess model. Ambiguity parameters of regularization is so chosen that the model falls into…

High Energy Physics - Theory · Physics 2015-02-26 Anisur Rahaman

The analysis of twisted (vortex) paraxial photons and electrons is fulfilled in the framework of relativistic quantum mechanics. The use of the Foldy-Wouthuysen representation radically simplifies a description of relativistic electrons and…

Quantum Physics · Physics 2019-09-25 Alexander J. Silenko , Pengming Zhang , Liping Zou

The recently observed large Rashba-type spin splitting in the BiTeX (X = I, Br, Cl) bulk states due to the absence of inversion asymmetry and large charge polarity enables observation of the transition in Fermi surface topology from…

Mesoscale and Nanoscale Physics · Physics 2015-07-15 Fei-Xiang Xiang , Xiao-Lin Wang , Menno Veldhorst , Shi-Xue Dou , Michael S. Fuhrer

Toroidal vortices are whirling disturbances rotating about a ring-shaped core while advancing in the direction normal to the ring orifice. Toroidal vortices are commonly found in nature and being studied in a wide range of disciplines. Here…

Optics · Physics 2022-06-06 Chenhao Wan , Qian Cao , Jian Chen , Andy Chong , Qiwen Zhan

Discrete trigonometric transformations, such as the discrete Fourier and cosine/sine transforms, are important in a variety of applications due to their useful properties. For example, one well-known property is the convolution theorem for…

Information Theory · Computer Science 2015-10-05 Xing Ouyang , Cleitus Antony , Fatima Gunning , Hongyu Zhang , Yong Liang Guan

Torus canards are solutions of slow/fast systems that alternate between attracting and repelling manifolds of limit cycles of the fast subsystem. A relatively new dynamic phenomenon, torus canards have been found in neural applications to…

Dynamical Systems · Mathematics 2017-09-13 Theodore Vo

It is shown that the IIB matrix model compactified on a six-dimensional torus with a nontrivial topology can provide chiral fermions and matter content close to the standard model on our four-dimensional spacetime. In particular, generation…

High Energy Physics - Theory · Physics 2015-03-17 Hajime Aoki

An irrational toric variety X is an analytic subset of the simplex associated to a finite configuration of real vectors. The positive torus acts on X by translation, and we consider limits of sequences of these translations. Our main result…

Algebraic Geometry · Mathematics 2017-05-17 Elisa Postinghel , Frank Sottile , Nelly Villamizar

Under supercoiling constraints, naked DNA, such as a large part of bacterial DNA, folds into braided structures called plectonemes. The double-helix can also undergo local structural transitions, leading to the formation of denaturation…

Biological Physics · Physics 2017-08-08 Thibaut Lepage , Ivan Junier

Valleytronics has emerged as a promising paradigm, enabling comprehensive control of the valley degree of freedom (DoF) for energy-efficient and high-speed information processing. However, backscattering-induced valley depolarization…

We study families of polynomial dynamical systems inspired by biochemical reaction networks. We focus on complex balanced mass-action systems, which have also been called toric. They are known or conjectured to enjoy very strong dynamical…

Algebraic Geometry · Mathematics 2022-02-02 Laura Brustenga i Moncusí , Gheorghe Craciun , Miruna-Stefana Sorea

We prove that a 3--dimensional hyperbolic cusp with convex polyhedral boundary is uniquely determined by its Gauss image. Furthermore, any spherical metric on the torus with cone singularities of negative curvature and all closed…

Differential Geometry · Mathematics 2009-08-17 François Fillastre , Ivan Izmestiev

Regular ring lattices (RRLs) are defined as peculiar undirected circulant graphs constructed from a cycle graph, wherein each node is connected to pairs of neighbors that are spaced progressively in terms of vertex degree. This kind of…

Systems and Control · Electrical Eng. & Systems 2024-11-19 Marco Fabris

We present the field-line modeling, design and construction of a prototype circular-coil tokamak-torsatron hybrid called Proto-CIRCUS. The device has a major radius R = 16 cm and minor radius a < 5 cm. The six "toroidal field" coils are…

Plasma Physics · Physics 2014-10-10 A. W. Clark , M. Doumet , K. C. Hammond , Y. Kornbluth , D. A. Spong , R. Sweeney , F. A. Volpe

Vortex coherent structures on arrays of nonlinear oscillators joined by weak links into topologically nontrivial two-dimensional discrete manifolds have been theoretically studied. A circuit of nonlinear electric oscillators coupled by…

Pattern Formation and Solitons · Physics 2020-07-01 Victor P. Ruban

Discrete vortex, formed by a one-dimensional (1D) ring array of lasers, contains high output power as compared to a conventional continuous vortex, therefore, has attracted considerable interest due to widespread applications in various…

Optics · Physics 2023-10-20 Vasu Dev , Vishwa Pal

In this work, we introduce a new graph convexity, that we call Cycle Convexity, motivated by related notions in Knot Theory. For a graph $G=(V,E)$, define the interval function in the Cycle Convexity as $I_{cc}(S) = S\cup \{v\in V(G)\mid…

Combinatorics · Mathematics 2020-12-11 Júlio Araújo , Victor Campos , Darlan Girão , João Nogueira , António Salgueiro , Ana Silva